DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sidpn and Bhlhe41

DIOPT Version :9

Sequence 1:NP_523599.1 Gene:Sidpn / 35168 FlyBaseID:FBgn0032741 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_038964817.1 Gene:Bhlhe41 / 117095 RGDID:70900 Length:410 Species:Rattus norvegicus


Alignment Length:471 Identity:108/471 - (22%)
Similarity:161/471 - (34%) Gaps:156/471 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QDISKRTNK---PLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKHTKLEKADILELTV 108
            :|.:|.|.|   .|:||:||.|||:.:|.||.|:.|..|.....:         ||||.:||||:
  Rat    38 RDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGH---------LEKAVVLELTL 93

  Fly   109 RHF--------QRH----------RNLDDPT---VNKYRAGYTDCAREVARYLA-----TPEPPP 147
            :|.        |:|          |:|..|.   ::.:.:|:..||:||.:|||     ||..|.
  Rat    94 KHLKALTALTEQQHQKIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLARFESWTPREPR 158

  Fly   148 MGTMPTLAEPGSKARLLRHLDQCIAEIDVEICPHSTAAFAESPSSSSCFDLNHGKKSQPEEHSLD 212
            .            |:|:.||.....::   :.|..|.  ...|..:.|                 
  Rat   159 C------------AQLVSHLHAVATQL---LTPQVTP--GRGPGRAPC----------------- 189

  Fly   213 YSSQDSNPVDYSKGLKMVAAEQRTLPVTPAPQDENNNRGLQAQAQTPIPIQVQSQTQGQTSPHVD 277
             |:..:......:..:.|...|||.|.|....|.:.:.|...:|:.. ...|:.:..|..||   
  Rat   190 -SAGAAAASGSERVARCVPVIQRTQPGTEPEHDTDTDSGYGGEAEQG-RAAVKQEPPGDPSP--- 249

  Fly   278 AVAPSELSYEEDRNKVCANVLEQYKQQLKAHVQQQPESANGVLVLP--------------PHYVQ 328
              ||..|..|                            |.|.|:.|              ..:.|
  Rat   250 --APKRLKLE----------------------------ARGALLGPEPALLGSLVALGGGAPFAQ 284

  Fly   329 LAAA--------LGLSAQPLVDPIATRTDFERLIELQRVQPHLAGKLSPSFPGGLEAAHVAAAAA 385
            .|||        |..||...|.|...::..::.:     .|..|......:| |:.||..|||||
  Rat   285 PAAAPFCLPFYLLSPSAAAYVQPWLDKSGLDKYL-----YPAAAAPFPLLYP-GIPAAAAAAAAA 343

  Fly   386 AYANSMAVAASAGASVAAMATSGAGTPTVHQE--RPASVAASVSSGVSMSELKSMPATQQSSPRS 448
            |:    ...:|..:.....|.|.||.|.:..|  .|.|:               .|....|....
  Rat   344 AF----PCLSSVLSPPPEKAGSAAGAPFLAHEVAPPGSL---------------RPQHAHSRTHL 389

  Fly   449 ESGIGSNENEAPATSP 464
            ...:....::..||.|
  Rat   390 PHAVNPESSQEDATQP 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidpnNP_523599.1 HLH 48..117 CDD:238036 30/89 (34%)
Hairy_orange 125..172 CDD:284859 15/51 (29%)
Bhlhe41XP_038964817.1 bHLH-O_DEC2 31..122 CDD:381593 31/92 (34%)
ORANGE 129..175 CDD:128787 15/60 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10985
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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