DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sidpn and her4.4

DIOPT Version :9

Sequence 1:NP_523599.1 Gene:Sidpn / 35168 FlyBaseID:FBgn0032741 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001121862.1 Gene:her4.4 / 100149066 ZFINID:ZDB-GENE-081031-104 Length:152 Species:Danio rerio


Alignment Length:110 Identity:33/110 - (30%)
Similarity:53/110 - (48%) Gaps:24/110 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLVSSTQNVTSSQDISKRTNKPLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKHTKLE 99
            |.:||.:.:     ::.:..||::||.||.|||.|:..||.|:        |:....|...::.|
Zfish     7 GSISSRETL-----LTNKLRKPMVEKIRRERINSSIEKLKTLL--------AQEFVKQQPDSRQE 58

  Fly   100 KADILELT---VRHFQRHRNLDDPTVNKYRAGYTDCAREVARYLA 141
            ||||||:|   :|..|:.....|        |.:.|.:|...:|:
Zfish    59 KADILEMTLDFLRRSQKSSAAGD--------GRSRCVQEAVSFLS 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidpnNP_523599.1 HLH 48..117 CDD:238036 25/71 (35%)
Hairy_orange 125..172 CDD:284859 4/17 (24%)
her4.4NP_001121862.1 HLH 19..75 CDD:238036 24/63 (38%)
ORANGE 77..123 CDD:128787 5/27 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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