Sequence 1: | NP_001260548.1 | Gene: | CG31792 / 35163 | FlyBaseID: | FBgn0051792 | Length: | 1323 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036822.1 | Gene: | Abcb4 / 24891 | RGDID: | 620248 | Length: | 1278 | Species: | Rattus norvegicus |
Alignment Length: | 1385 | Identity: | 307/1385 - (22%) |
---|---|---|---|
Similarity: | 564/1385 - (40%) | Gaps: | 315/1385 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 64 SWANELETNKKNASLL--RVLFRVF---GRYFVFLGLVLFC-----LEVILTVQPMFLMKLISSF 118
Fly 119 SNPS-PTSNGVA--------------YAY-----AGGVILGSALKVILMNPYSFAVTHLGLKIRV 163
Fly 164 GVSSMIYRKCLRLTKTDLG--------EIST--GHIINLISNDLG-RMDTFIQFTHYLWLAPLQA 217
Fly 218 LMVTYLMYQEIGIAAVFGMTFILLFIPLQMYLGKKISGLRLKTAIRSDKRM-------RIMTEII 275
Fly 276 AGIQVIKMYAWELPFEKMVAHARHKEINSI-RHVAYAKCLIWSFNRFLTPVSIFLSLVGFVLMG- 338
Fly 339 RFLTAEVAFLITAYYN---------VVRTNMTAYFSV-----GVTQTAETLVSIKRVQKLLLSGE 389
Fly 390 VVAKDENVVSNGAEEDLQEAREKLLVTPTPMRAPEKPPHNSEDCVSISELKAKWTTNSPDYTLSG 454
Fly 455 VNLQVHAGALVAIVGHTGSGKSSLIQAILGELRVESGEIEVTGS-------------MSYASQEP 506
Fly 507 WLFSGTVRQNILFGQ---PMDR--------RRYDLVVRKCALERDFELLPLKDKTILGDRGASLS 560
Fly 561 GGQKARISLARSVYRDASIYLLDDPLSAVDSSVARRLFEECLRGHLRDKIVILVTHQLQFLQQAD 625
Fly 626 QIVIMEMGKVKAVGTY-ESLHKSGLDFGIV-------------LDDPVNDNEA----AEDRSRTS 672
Fly 673 SITDQRRSSVKSVLSHAESCPEDVGEEQKINLQRQQLGRNGLGVYV-----------DYFRAG-- 724
Fly 725 ----GGFL--SFSVVMTFFVCSQGLASLGDYFLSPWVSRNEKMVAHNYTTDAKDADFEMHAAYIY 783
Fly 784 MLITVLSIMVTIKRSFLFFNLAMRASIQLHNSMFRGISRASMYFF--NKNPAGSILNRFSKDMGQ 846
Fly 847 VDEMLPTIIMTVIQDFLLFGGNIIVIAIVN---PLFLIPALAF----GIVIYYLRSFYLKTSLDV 904
Fly 905 KRLEASTRSPVYSHFAASLNGLSTI------RAFGA-----------GSILEAEFDGYQDMHSSA 952
Fly 953 SYMFISTSRAFAYWMDIFCVLFIAMITLS--------FFIFPPSSAADVGLAITQAMGLTGTVQW 1009
Fly 1010 TVRQSAELENTMISVERMIEYEEIEPEGPLEATADKKPHES-WPE--QGKIEFVELSLRYEPYLK 1071
Fly 1072 SESVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYND--GSVRIDDKDTNDMGLHDLRSK 1134
Fly 1135 ISIIPQEPVLFSGTVRHNL---DPFDEYSDDRLWCALEEVELKDVVASVATGLETKITEGGSNFS 1196
Fly 1197 VGQRQLVCLARAILRDNRILVMDEATANVDPQTDALIQATIRNKFRE-CTVLTVAHRLHTIMDSD 1260
Fly 1261 RVLVMDAGRVVEFGTPYELL 1280 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG31792 | NP_001260548.1 | CFTR_protein | 12..1281 | CDD:273530 | 307/1385 (22%) |
ABC_membrane | 94..360 | CDD:294371 | 54/319 (17%) | ||
ABCC_MRP_domain1 | 434..634 | CDD:213217 | 69/223 (31%) | ||
ABC_membrane | 736..980 | CDD:294371 | 50/269 (19%) | ||
ABCC_MRP_domain2 | 1055..1276 | CDD:213211 | 72/226 (32%) | ||
Abcb4 | NP_036822.1 | PTZ00265 | 29..1271 | CDD:240339 | 305/1378 (22%) |
ABC_membrane | 58..342 | CDD:279056 | 57/329 (17%) | ||
ABC_MTABC3_MDL1_MDL2 | 392..628 | CDD:213216 | 76/246 (31%) | ||
Interaction with HAX1. /evidence=ECO:0000269|PubMed:15159385 | 622..646 | 2/23 (9%) | |||
ABC_membrane | 714..984 | CDD:279056 | 58/312 (19%) | ||
ABC_MTABC3_MDL1_MDL2 | 1033..1272 | CDD:213216 | 74/230 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |