DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31792 and Abcb4

DIOPT Version :9

Sequence 1:NP_001260548.1 Gene:CG31792 / 35163 FlyBaseID:FBgn0051792 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_036822.1 Gene:Abcb4 / 24891 RGDID:620248 Length:1278 Species:Rattus norvegicus


Alignment Length:1385 Identity:307/1385 - (22%)
Similarity:564/1385 - (40%) Gaps:315/1385 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SWANELETNKKNASLL--RVLFRVF---GRYFVFLGLVLFC-----LEVILTVQPMFLMKLISSF 118
            |.:|:....||..:|:  ..|||..   .:.|:.||..:..     |.:::.|......|.:.:.
  Rat    22 SISNQSREKKKKVNLIGPLTLFRYSDWQDKLFMLLGTAMAIAHGSGLPLMMIVFGEMTDKFVDNA 86

  Fly   119 SNPS-PTSNGVA--------------YAY-----AGGVILGSALKVILMNPYSFAVTHLGLKIRV 163
            .|.| |.:..::              |||     .|||:|.:.::|      ||.....|.:|| 
  Rat    87 GNFSLPVNFSLSMLNPGRILEEEMTRYAYYYSGLGGGVLLAAYIQV------SFWTLAAGRQIR- 144

  Fly   164 GVSSMIYRKCLRLTKTDLG--------EIST--GHIINLISNDLG-RMDTFIQFTHYLWLAPLQA 217
            .:....:...||   .::|        |::|  ...|:.||..:| ::..|.|            
  Rat   145 KIRQKFFHAILR---QEMGWFDIKGTTELNTRLTDDISKISEGIGDKVGMFFQ------------ 194

  Fly   218 LMVTYLMYQEIGIAAVFGMTFILLFIPLQMYLGKKISGLRLKTAIRSDKRM-------RIMTEII 275
            .:.|:.....:|....:.:|.:::.|...:.|...:....|.|.  |||.:       .:..|.:
  Rat   195 AIATFFAGFIVGFIRGWKLTLVIMAITAILGLSTAVWAKILSTF--SDKELAAYAKAGAVAEEAL 257

  Fly   276 AGIQVIKMYAWELPFEKMVAHARHKEINSI-RHVAYAKCLIWSFNRFLTPVSIFLSLVGFVLMG- 338
            ..|:.:..:.           .::||:... :|:..||           .:.|..::...:.|| 
  Rat   258 GAIRTVIAFG-----------GQNKELERYQKHLENAK-----------KIGIKKAISANISMGI 300

  Fly   339 RFLTAEVAFLITAYYN---------VVRTNMTAYFSV-----GVTQTAETLVSIKRVQKLLLSGE 389
            .||....::.:..:|.         .:...||.:||:     .|.|.|..:.:....:     |.
  Rat   301 AFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFPNAR-----GA 360

  Fly   390 VVAKDENVVSNGAEEDLQEAREKLLVTPTPMRAPEKPPHNSEDCVSISELKAKWTTNSPDYTLSG 454
            .....:.:.:|...:...|...|              |.:.:..:..|::...:.:.:....|.|
  Rat   361 AYVIFDIIDNNPKIDSFSERGHK--------------PDSIKGNLEFSDVHFSYPSRANIKILKG 411

  Fly   455 VNLQVHAGALVAIVGHTGSGKSSLIQAILGELRVESGEIEVTGS-------------MSYASQEP 506
            :||:|.:|..||:||::|.|||:.:|.:........|.|.:.|.             :...||||
  Rat   412 LNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRNFNVRCLREFIGVVSQEP 476

  Fly   507 WLFSGTVRQNILFGQ---PMDR--------RRYDLVVRKCALERDFELLPLKDKTILGDRGASLS 560
            .|||.|:.:||.:|:   .||.        ..||.:::          ||.|..|::|||||.||
  Rat   477 VLFSTTIAENIRYGRGNVTMDEIKKAVKEANAYDFIMK----------LPQKFDTLVGDRGAQLS 531

  Fly   561 GGQKARISLARSVYRDASIYLLDDPLSAVDSSVARRLFEECLRGHLRDKIVILVTHQLQFLQQAD 625
            ||||.||::||::.|:..|.|||:..||:|:.....: :..|......:..|::.|:|..::.||
  Rat   532 GGQKQRIAIARALVRNPKILLLDEATSALDTESEAEV-QAALDKAREGRTTIVIAHRLSTVRNAD 595

  Fly   626 QIVIMEMGKVKAVGTY-ESLHKSGLDFGIV-------------LDDPVNDNEA----AEDRSRTS 672
            .|...|.|.:...|:: |.:.|.|:.|.:|             .:..::|.:|    |.:..:..
  Rat   596 VIAGFEDGVIVEQGSHSELIKKEGIYFRLVNMQTSGSQILSEEFEVELSDEKAAGGVAPNGWKAR 660

  Fly   673 SITDQRRSSVKSVLSHAESCPEDVGEEQKINLQRQQLGRNGLGVYV-----------DYFRAG-- 724
            ...:..:.|:||..:|          :.:::::..:|..|...|..           .||..|  
  Rat   661 IFRNSTKKSLKSSRAH----------QNRLDVETNELDANVPPVSFLKVLRLNKTEWPYFVVGTL 715

  Fly   725 ----GGFL--SFSVVMTFFVCSQGLASLGDYFLSPWVSRNEKMVAHNYTTDAKDADFEMHAAYIY 783
                .|.|  :||::::..:...|   .||                   ...|.....|. :.::
  Rat   716 CAIANGALQPAFSIILSEMIAIFG---PGD-------------------DTVKQQKCNMF-SLVF 757

  Fly   784 MLITVLSIMVTIKRSFLFFNLAMRASIQLHNSMFRGISRASMYFF--NKNPAGSILNRFSKDMGQ 846
            :.:.|.|......:.|.|.......:.:|.:..|:.:.|..|.:|  :||..|::..|.:.|..|
  Rat   758 LGLGVHSFFTFFLQGFTFGKAGEILTTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATDAAQ 822

  Fly   847 VDEMLPTIIMTVIQDFLLFGGNIIVIAIVN---PLFLIPALAF----GIVIYYLRSFYLKTSLDV 904
            |.....|.:..:.|:....|..||:..|..   .|.|:..:.|    |||  .::........|.
  Rat   823 VQGATGTRLALIAQNTANLGTGIIISFIYGWQLTLLLLSVVPFIAVAGIV--EMKMLAGNAKRDK 885

  Fly   905 KRLEASTRSPVYSHFAASLNGLSTI------RAFGA-----------GSILEAEFDGYQDMHSSA 952
            |.:||:.:..     ..::..:.|:      |.|.:           .|:.:|...|        
  Rat   886 KEMEAAGKIA-----TEAIENIRTVVSLTQERKFESMYVEKLHGPYRNSVRKAHIYG-------- 937

  Fly   953 SYMFISTSRAFAYWMDIFCVLFIAMITLS--------FFIFPPSSAADVGLAITQAMGLTGTVQW 1009
              :..|.|:||.|:....|..|.:.:.::        ..:|   ||..:|..   |:|...:.  
  Rat   938 --ITFSISQAFMYFSYAGCFRFGSYLIVNGHMRFKDVILVF---SAIVLGAV---ALGHASSF-- 992

  Fly  1010 TVRQSAELENTMISVERMIEYEEIEPEGPLEATADKKPHES-WPE--QGKIEFVELSLRYEPYLK 1071
                :.:.....:|...:....|.:|      ..|....|. ||:  :|.:.|.|:...| |...
  Rat   993 ----APDYAKAKLSAAYLFSLFERQP------LIDSYSREGMWPDKFEGSVTFNEVVFNY-PTRA 1046

  Fly  1072 SESVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYND--GSVRIDDKDTNDMGLHDLRSK 1134
            :..||:.||..:|..:.:.:||.:|.|||:::..|.|. |:.  |:|.:|.::...:.:..||::
  Rat  1047 NVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERF-YDPMAGTVLLDGQEAKKLNVQWLRAQ 1110

  Fly  1135 ISIIPQEPVLFSGTVRHNL---DPFDEYSDDRLWCALEEVELKDVVASVATGLETKITEGGSNFS 1196
            :.|:.|||:||..::..|:   |.....|.|.:..|.:|..:...:.::....||::.:.|:..|
  Rat  1111 LGIVSQEPILFDCSIAKNIAYGDNSRVVSQDEIVRAAKEANIHPFIETLPQKYETRVGDKGTQLS 1175

  Fly  1197 VGQRQLVCLARAILRDNRILVMDEATANVDPQTDALIQATIRNKFRE-CTVLTVAHRLHTIMDSD 1260
            .||:|.:.:|||::|..|:|::||||:.:|.:::.::|..: :|.|| .|.:.:||||.||.::|
  Rat  1176 GGQKQRIAIARALIRQPRVLLLDEATSALDTESEKVVQEAL-DKAREGRTCIVIAHRLSTIQNAD 1239

  Fly  1261 RVLVMDAGRVVEFGTPYELL 1280
            .::|:|.|:|.|.||..:||
  Rat  1240 LIVVIDNGKVKEHGTHQQLL 1259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31792NP_001260548.1 CFTR_protein 12..1281 CDD:273530 307/1385 (22%)
ABC_membrane 94..360 CDD:294371 54/319 (17%)
ABCC_MRP_domain1 434..634 CDD:213217 69/223 (31%)
ABC_membrane 736..980 CDD:294371 50/269 (19%)
ABCC_MRP_domain2 1055..1276 CDD:213211 72/226 (32%)
Abcb4NP_036822.1 PTZ00265 29..1271 CDD:240339 305/1378 (22%)
ABC_membrane 58..342 CDD:279056 57/329 (17%)
ABC_MTABC3_MDL1_MDL2 392..628 CDD:213216 76/246 (31%)
Interaction with HAX1. /evidence=ECO:0000269|PubMed:15159385 622..646 2/23 (9%)
ABC_membrane 714..984 CDD:279056 58/312 (19%)
ABC_MTABC3_MDL1_MDL2 1033..1272 CDD:213216 74/230 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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