DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31792 and Tap1

DIOPT Version :9

Sequence 1:NP_001260548.1 Gene:CG31792 / 35163 FlyBaseID:FBgn0051792 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_114444.2 Gene:Tap1 / 24811 RGDID:3817 Length:725 Species:Rattus norvegicus


Alignment Length:603 Identity:136/603 - (22%)
Similarity:257/603 - (42%) Gaps:98/603 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   726 GFLS-----FSVVMTFFVCSQGLASLGD----YF---LSPWVSRNEKMVAHNYTTDAKDADFEMH 778
            |||.     ..:|:...:    |:.||:    :|   ::.|:.::            |.|.....
  Rat   155 GFLDSKKGRLHLVLVLLI----LSCLGEMAIPFFTGRITDWILQD------------KTAPSFAR 203

  Fly   779 AAYIYMLITVLSIMVTIKRSFLFFNLAM-RASIQLHNSMFRGISRASMYFFNKNPAGSILNRFSK 842
            ..::..::||.|..:......: :|:.| ....::|..:||.:......||.|||.|||.:|.::
  Rat   204 NMWLMCILTVASTALEFAGDGI-YNITMGHMHSRVHGEVFRAVLHQETGFFLKNPTGSITSRVTE 267

  Fly   843 DMGQVDEMLPTIIM---------TVIQDFLLFGG---NIIVIAIVNPLFLIPALAFGIVIYYLRS 895
            |...|.|.:...:.         ..:..|:::|.   .::.:..:..|||:|.          |.
  Rat   268 DTSNVCESISDKLNLFLWYLGRGLCLLAFMIWGSFYLTVVTLLSLPLLFLLPR----------RL 322

  Fly   896 FYLKTSLDVKRLEASTRSPVYSHFAASLNGLSTIRAFGAGSILEAEFDGYQDMHSSASYMFISTS 960
            ..:..||.||..|:..:|...:  ..:|:.:.|:|:|.     ..|.:..:..........::..
  Rat   323 GKVYQSLAVKVQESLAKSTQVA--LEALSAMPTVRSFA-----NEEGEAQKFRQKLEEMKPLNKK 380

  Fly   961 RAFAYWMDIFCVLFIAMITLSFFIF---------PPSSAADVGLAITQAMGLTGTVQWTVRQSAE 1016
            .|.||..:::.:....|:.....::         ..||...|...:.| :..|..|:..:.....
  Rat   381 EALAYVTEVWTMSVSGMLLKVGILYLGGQLVVRGAVSSGNLVSFVLYQ-LQFTRAVEVLLSIYPS 444

  Fly  1017 LENTMISVERMIEYEEIEPEGPLE---ATADKKPHESWPEQGKIEFVELSLRYEPYLKSESVLKS 1078
            ::.::.:.|::.||.:..|..||.   |..:.|        |.::|.::|..| |...:..||:.
  Rat   445 MQKSVGASEKIFEYLDRTPCSPLSGSLAPLNMK--------GLVKFQDVSFAY-PNHPNVQVLQG 500

  Fly  1079 LSFVIKPKEKVGIVGRTGAGKSSLINALFRLSY--NDGSVRIDDKDTNDMGLHDLRSKISIIPQE 1141
            |:|.:.|.:...:||..|:|||: :.||.:..|  ..|.|.:|.:.......|.|.::::.:.||
  Rat   501 LTFTLYPGKVTALVGPNGSGKST-VAALLQNLYQPTGGKVLLDGELLVQYDHHYLHTQVAAVGQE 564

  Fly  1142 PVLFSGTVRHNLDPFDEYSDDRLWCALEEVE-------LKDVVASVATGLETKITEGGSNFSVGQ 1199
            |:||..:.|.|:    .|...|. ..:||:.       ..|.::....|.:|::.|.|:..|.||
  Rat   565 PLLFGRSFRENI----AYGLTRT-PTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLSGGQ 624

  Fly  1200 RQLVCLARAILRDNRILVMDEATANVDPQTDALIQATIRN--KFRECTVLTVAHRLHTIMDSDRV 1262
            ||.|.||||::|..|:|::|:||:.:|......:|..:..  ::...|||.:..:|.....:..:
  Rat   625 RQAVALARALIRKPRLLILDDATSALDAGNQLRVQRLLYESPEWASRTVLLITQQLSLAERAHHI 689

  Fly  1263 LVMDAGRVVEFGTPYELL 1280
            |.:..|.|.|.||..:|:
  Rat   690 LFLKEGSVCEQGTHLQLM 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31792NP_001260548.1 CFTR_protein 12..1281 CDD:273530 136/603 (23%)
ABC_membrane 94..360 CDD:294371
ABCC_MRP_domain1 434..634 CDD:213217
ABC_membrane 736..980 CDD:294371 49/263 (19%)
ABCC_MRP_domain2 1055..1276 CDD:213211 67/231 (29%)
Tap1NP_114444.2 3a01208 2..717 CDD:273363 136/603 (23%)
ABC_membrane 177..435 CDD:279056 52/288 (18%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 352..397 7/49 (14%)
Part of the peptide-binding site. /evidence=ECO:0000250|UniProtKB:Q03518 430..464 5/33 (15%)
P-loop_NTPase 469..697 CDD:304359 66/242 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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