DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31792 and haf-8

DIOPT Version :9

Sequence 1:NP_001260548.1 Gene:CG31792 / 35163 FlyBaseID:FBgn0051792 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_502776.1 Gene:haf-8 / 190369 WormBaseID:WBGene00001818 Length:633 Species:Caenorhabditis elegans


Alignment Length:555 Identity:135/555 - (24%)
Similarity:252/555 - (45%) Gaps:82/555 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   784 MLITVLSIMVTIKRSFLFFNLAMRASIQLHN---SMFRGISRASMYFFNKNPAGSILNRFSKDMG 845
            :|:.::.......:|..:|.:.....:...|   .:||.|....:.||::|..|.:::|.:.|..
 Worm    99 LLLALIQFSEATCKSACYFFMQYAEKLTARNIRIQLFRSILHQEISFFDENKTGQLVSRITHDSE 163

  Fly   846 QVDEMLPTIIMTVIQDFLLFGGNI-IVIAIVNPLFLIPALAFGIVIYYLRSFYLKTSLDVKRLEA 909
            .:...||..|.|::.:..:|.|:| |:......|.|...:.|.|.:...|.:    .|.|::|..
 Worm   164 SISNTLPVHIETLVNNLFMFFGSIPIMFCYSWQLTLTSFIEFPITLLMTRYY----GLAVEKLSE 224

  Fly   910 STRSPVYSHFAAS-------LNGLSTIRAFGAGSILEAEFDGYQDMHSSASYMFISTSRAFA--- 964
            ......    |||       |:.:.|:|:|.|     ..|:..:...::..:..|||.....   
 Worm   225 KENDAT----AASNETVEEVLSAIRTVRSFAA-----ENFEQKRYTKNTEDWFKISTKTVTLGTI 280

  Fly   965 ---YW------MDIFCVLF------------IAMITLSFFIFPPSSA----ADVGLAITQAMGLT 1004
               :|      .|:...|:            .|::|..|:.:...:|    :.:...:.:.:||:
 Worm   281 YNYFWALMLRSQDVIRYLYGGYLALNGRMAPEALLTFIFYHWRLHTAINAFSSLFSGVMKTIGLS 345

  Fly  1005 GTVQWTVRQSAELENTMISVERMIEYEEIEPEGPLEATADKKPHESWPEQGKIEFVELSLRYEPY 1069
            ..|...:.:..:|:         .::....||                .||||||..:...| |.
 Worm   346 RKVIHLINRKPQLD---------YDFGTETPE----------------IQGKIEFEVVEFAY-PT 384

  Fly  1070 LKSESVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYNDGSVRI--DDKDTNDMGLHDLR 1132
            .|:.:|:..::..|:..:.|.:||.:|.|||:|: :|.:..|...|.||  |.....::......
 Worm   385 RKTVNVINGINLSIESGKTVALVGPSGNGKSTLV-SLIQQFYTPQSGRILTDGIPIQNINHQHYH 448

  Fly  1133 SKISIIPQEPVLFSGTVRHN-LDPFDEYSDDRLWCALEEVELKDVVASVATGLETKITEGGSNFS 1196
            |.|:::.|||.|||||:|.| |...:..:::.:..|.|...:.:.|:.:..|.:||..|.|...|
 Worm   449 SNIALVAQEPTLFSGTIRENILFGIENGTEEAMLKAAEMANVHEFVSKMDDGYDTKCGEKGVQMS 513

  Fly  1197 VGQRQLVCLARAILRDNRILVMDEATANVDPQTDALIQATIRNKFRECTVLTVAHRLHTIMDSDR 1261
            .||:|.:.:|||::|:.|:|::||||:.:|.:::.::|..:....:|.||:.:||||.|:..:.:
 Worm   514 GGQKQRIAIARALIRNPRVLILDEATSALDSESEGMVQEALNKCAKERTVIVIAHRLSTVRKAQK 578

  Fly  1262 VLVMDAGRVVEFGTPYELLTADDTNAFQDLVKQTG 1296
            :.|::.|.|.|.|...||:...|...::.:.||.|
 Worm   579 IAVIENGSVKEMGCHDELMENQDGLYYKLVSKQLG 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31792NP_001260548.1 CFTR_protein 12..1281 CDD:273530 131/538 (24%)
ABC_membrane 94..360 CDD:294371
ABCC_MRP_domain1 434..634 CDD:213217
ABC_membrane 736..980 CDD:294371 45/230 (20%)
ABCC_MRP_domain2 1055..1276 CDD:213211 74/223 (33%)
haf-8NP_502776.1 MdlB 42..613 CDD:224055 134/553 (24%)
ABC_membrane 63..318 CDD:279056 46/231 (20%)
ABC_MTABC3_MDL1_MDL2 373..611 CDD:213216 75/239 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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