DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31792 and pgp-7

DIOPT Version :9

Sequence 1:NP_001260548.1 Gene:CG31792 / 35163 FlyBaseID:FBgn0051792 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_001361833.1 Gene:pgp-7 / 188697 WormBaseID:WBGene00004001 Length:1152 Species:Caenorhabditis elegans


Alignment Length:1220 Identity:272/1220 - (22%)
Similarity:508/1220 - (41%) Gaps:258/1220 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 ETNKKN----ASLLRVLFRVFGRY--FVFLGLVLFCLEVILTVQP----------MFLMKLISSF 118
            ::|:|.    .|.:||:|:....:  |:||..|.|.| |....||          ..|:.:.::.
 Worm    15 QSNEKKPLELCSFIRVIFKCTSCFEKFLFLIGVFFSL-VTGLCQPFVSYTLGETAQVLVTITNAI 78

  Fly   119 SNPS--PTSNGVAY-AYAGGV--------ILGSALKVILMNPYSFA-VTHLGLKIRVGVSSMIYR 171
            :|.:  |.....|| .|..|:        :.|.|.       ::|| :.|..:|. || .:..||
 Worm    79 NNKTIDPADLKKAYEQYERGMYQVVLYFFLCGCAY-------FTFASIQHAIMKY-VG-DNTTYR 134

  Fly   172 -------KCLRLTKTDLGEISTGHIINLISNDLGRM-DTFIQFTHYLWLAPLQALMVTYLMYQEI 228
                   :.||........:||||:..:::::|.|. :.|.:     .:|.:.||:..::    :
 Worm   135 VRKQYISRLLRKDAEYFDNVSTGHLSTVLNDNLERFREVFNE-----KIALIFALLTDFV----V 190

  Fly   229 GIAAVFGMTFILLFIPLQMYLGKKISGL-----RLKTAIRSDKRMRIMTEIIAGIQVIKMY--AW 286
            |.|..|...:.|....:...||...||.     .:||..:.:........|  ..|.:..|  ..
 Worm   191 GTALAFYTDWRLASYGIFFSLGIAFSGFINSAGVMKTTGKQNTHYANAGSI--AFQTLGAYKTVC 253

  Fly   287 ELPFEKMVAHARHKEINSIRHVAYAKCLIWSFNR-----FLTPVSIFLSLVG--FVLMGRFLTAE 344
            .|..:........:|:.:.......:.|::|.:|     |...::..:..||  .:..|   :.|
 Worm   254 SLNGQNTEIERYTEELKAGEKYGIHRALMYSISRGFTYFFCNSLNTVILYVGANMIYSG---SLE 315

  Fly   345 VAFLITAYYNVVRTNMTAYFSVGVTQTAETLVSIKRVQKLLLS----GEVVAKDENVVSNGAEED 405
            .|.::..::         |...|....:|.|..|.|:...:.|    .|::.|::||:    |:|
 Worm   316 PAVVVRIFH---------YMMFGAFCLSEALPHISRLAGAISSTAPIAEMLIKEDNVI----EKD 367

  Fly   406 LQEAREKLLVTPTPMRAPEKPPHNSEDCVSISELKAKWTTNSPDYTLSGVNLQVHAGALVAIVGH 470
            ..:...::.|...               :|...:|..:.|......|.|::..|..|..:|:||.
 Worm   368 ETDYDVEVEVNGN---------------ISFKNVKFSYPTRPDAQVLKGISFDVQNGECIALVGA 417

  Fly   471 TGSGKSSLIQAILGELRVESGEIEVTGS-------------MSYASQEPWLFSGTVRQNILFGQP 522
            :|||||:::|.:|....::||.|.:.|.             :...||||.||:.|:.:||.||.|
 Worm   418 SGSGKSTVVQLLLHYYNIDSGNIFIDGMDLNDMNIKRLRRVIGVVSQEPVLFNTTIEENIRFGNP 482

  Fly   523 -----------MDRRRYDLVVRKCALERDFELLPLKDKTILGDRGASLSGGQKARISLARSVYRD 576
                       .....||.|   |:       .|...|||:|:||..||||||.||::||::.|:
 Worm   483 NVSLPEIYGALRKANAYDFV---CS-------FPKGIKTIVGERGTQLSGGQKQRIAIARTLVRN 537

  Fly   577 ASIYLLDDPLSAVDSSVARRLFEECLRGHLRDKIVILVTHQLQFLQQADQIVIMEMGKVKAVGTY 641
            ..|.|||:..||:|:. :.::.::.|....:.:..|:|.|:|..::.|.:|::|:.|::..||.:
 Worm   538 PKILLLDEATSALDNE-SEQVVQKALENASQGRTTIVVAHRLSTIRNASKIIVMQKGEIVEVGNH 601

  Fly   642 ESL-HKSGLDFGIVL-------DD-----PVNDNEAAEDRSRTSSITDQRRSSVKSVL--SHAES 691
            :.| .|.|:...:|.       ||     |:...:.:::.|...|...||.:|..:.:  ...|.
 Worm   602 DELIAKRGVYNDLVQAQLLESHDDHEELPPLAARQLSQELSPLHSYAIQRSTSNDAGVHDDDMER 666

  Fly   692 CPEDVGEE--QKINLQR--QQLGRNGLGVYVDYFRAGGGFLSFSVVMTFFVCS-QGLASLGD--- 748
            ..:::.:|  :|.||:.  :|...:...:::..|.:....:|:.::....|.: :|.|.:|:   
 Worm   667 ILDELSKEGAKKSNLREIVKQCRPDYCFLFIAVFGSAIQGVSYPILAQLIVRTYEGFAMIGEDML 731

  Fly   749 YFLSPWVSRNEKMVAHNYTTDAKDADFEMHAAYIYMLITVLSIMVTIKRSFLFFNLAMRASIQLH 813
            |:...|                         |..:|.:.|...:....:.:.|..::.:.|.:|.
 Worm   732 YYSHLW-------------------------ALSFMFLAVFRPLTLYCQYYYFGKVSEQLSTRLR 771

  Fly   814 NSMFRGISRASMYFFN--KNPAGSILNRFSKDMGQ----VDEMLPTIIMTVIQDFLLFGGNIIVI 872
            ...|..:......|::  .:.|..:.||.:.|...    ||:.|..:||||:         .|.|
 Worm   772 IKSFSHMLSLPCAFYDDPNHSATRLSNRLNTDSSNVKAAVDDRLGCVIMTVV---------AISI 827

  Fly   873 AIVNPLFLIPALAFGIVIY----YLRSF----YLKTSL--DVKRLEASTRSPVYSHFAASLNGLS 927
            ||.........:...::|:    ||..:    ..:||:  |....|.|.|:.:     .:|..:.
 Worm   828 AITTASLYCWKMTLEVLIFFPLLYLAEYCYDAATETSIQEDTIAFENSNRTAI-----EALENMR 887

  Fly   928 TIRAFG-AGSILEAEFDGYQDMHSSASYMFISTSRAFAYWMDIFCVLFIAMITLSFFIFPPSSAA 991
            |:||.. ...|:....:..|.:|.  ||...:..:..|..:.:.|.||:..::..|..:      
 Worm   888 TVRALNLEDKIMSLISEHLQKIHK--SYFKRAIIQGAANGLSLSCYLFVYSVSFKFGTY------ 944

  Fly   992 DVGLAITQAMGLTGT--VQWTVRQSAELENTMISVERMIEYEE-IEPEG------------PLEA 1041
               ||:.:.:....|  :..|:..:|.:..:  :...:.:|:: :...|            |..:
 Worm   945 ---LALRKEVAPMDTYLILETLSMTANMAGS--AAAYLPDYKKAVHAAGLIFHLFTYPATMPFSS 1004

  Fly  1042 TADKKPHESWPEQGKI--EFVELSLRYEPYLKSESVLKSLSFVIKPKEKVGIVGRTGAGKSSLIN 1104
            :..||.    .|:|:|  |.|:......|   ...:|..::..:.|.:.:.:||.:|.|||::|:
 Worm  1005 SDGKKN----IEKGEIIGENVQFHYDQRP---DRMILNGVNLKVDPGKTLALVGPSGCGKSTIIS 1062

  Fly  1105 ALFRLSYN-DGSVRIDDKDTNDMGLHDLRSKISIIPQEPVLFSGTVRHNL 1153
            .|.|..:. ||.|:||.::..|:.|:.|||.::::.|||.||:.::|.||
 Worm  1063 LLERFYHAVDGEVKIDSENVEDINLNHLRSNLALVSQEPTLFNCSIRENL 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31792NP_001260548.1 CFTR_protein 12..1281 CDD:273530 272/1220 (22%)
ABC_membrane 94..360 CDD:294371 59/309 (19%)
ABCC_MRP_domain1 434..634 CDD:213217 70/223 (31%)
ABC_membrane 736..980 CDD:294371 51/264 (19%)
ABCC_MRP_domain2 1055..1276 CDD:213211 34/102 (33%)
pgp-7NP_001361833.1 MdlB 42..621 CDD:224055 152/641 (24%)
ABC_MTABC3_MDL1_MDL2 381..618 CDD:213216 77/247 (31%)
ABC_6TM_Pgp_ABCB1_D2_like 686..994 CDD:350022 62/359 (17%)
TM helix 1 695..718 CDD:350022 2/22 (9%)
TM helix 2 733..781 CDD:350022 8/72 (11%)
TM helix 3 790..835 CDD:350022 15/53 (28%)
TM helix 4 836..885 CDD:350022 10/53 (19%)
TM helix 5 897..947 CDD:350022 11/60 (18%)
TM helix 6 956..989 CDD:350022 4/34 (12%)
P-loop_NTPase 1019..>1143 CDD:393306 32/97 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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