DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31792 and pgp-14

DIOPT Version :9

Sequence 1:NP_001260548.1 Gene:CG31792 / 35163 FlyBaseID:FBgn0051792 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_510128.1 Gene:pgp-14 / 181416 WormBaseID:WBGene00004008 Length:1327 Species:Caenorhabditis elegans


Alignment Length:1359 Identity:317/1359 - (23%)
Similarity:551/1359 - (40%) Gaps:275/1359 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LFRVFGRYF----VFLGLVLFCLEVILTVQPMFLM---KLISSFSNPSPTS-------NGVAYAY 132
            ||| :|:.|    :|:|.:  |..:....||:..:   ::.::.....|||       |...|.:
 Worm    93 LFR-YGKKFDYLLLFIGTI--CAIISGVSQPILALVSGRVTNALLVYPPTSKQFRNKANENVYIF 154

  Fly   133 AGGVILGSALKVILMNPYSFAVTHLGLKIRVG-VSSMIYRKCLRLTKTDLGEIST------GHII 190
            .|..|..|....|....:....|.:..::|.. |.|::.:......|...|.|:|      ..|.
 Worm   155 LGIGIFISITNFIQYMCFQHCCTRVMAQMRHRFVYSVLRQNAGWFDKNHSGTITTKLNDSMERIR 219

  Fly   191 NLISNDLGRMDTFIQFTHYLWLAPLQALMVTY-----LMYQEIGIAAVFGMTFILLFIPLQMYLG 250
            ..|.:.||     :....:..|  :.|::|.|     |....:|:|....:...|        |.
 Worm   220 EGIGDKLG-----VLLRGFAML--IAAIVVAYIYEWRLASMMLGVAPTCCICMSL--------LA 269

  Fly   251 KKISGLRLKTAIRSDKRMRIMTEIIAGIQVIKMYAWELPFEKMVAHARHK-EINSIRHVAYAK-- 312
            ::::...:|..|...|...|..|.:.|::.::.:..:   |:||  .|:: |:...|..|..|  
 Worm   270 RQMTSTTIKELIGVGKAGSIAEESLMGVRTVQAFNGQ---EEMV--GRYEAELEKGRKFAVWKGF 329

  Fly   313 --------CLIWSFNRFL---TPVSIFLSLVGFVLM-GRFLTAEVAFLITAYY-NVVRTNMTAYF 364
                    ...|.|: ||   .....:|..||.:.. |......::.|:.||: .::..:|....
 Worm   330 WSGFFGGLFFFWLFS-FLGCGMLYGAYLLKVGIITTPGDVFIVVMSMLLGAYFLGLISPHMMVLL 393

  Fly   365 SVGVTQTAETLVSIKRVQKLLLSGEVVAKDENVVSNGAEEDLQEAREKLLVTPTPMRAPEKPPHN 429
            :..|: .|....:|.||.|:....:...:.:|||..                             
 Worm   394 NARVS-AASIYQTIDRVPKIDPYSKAGKRLQNVVGR----------------------------- 428

  Fly   430 SEDCVSISELKAKWTTNSPDYTLSGVNLQVHAGALVAIVGHTGSGKSSLIQAILGELRVESGEIE 494
                |....:..::.:......|:|:||.|..|..||:|||:|.|||:.:..:......|:|.:.
 Worm   429 ----VKFENVHFRYPSRKDAKILNGLNLVVEPGTSVALVGHSGCGKSTSVGLLTRLYEPEAGNVT 489

  Fly   495 VTG-------------SMSYASQEPWLFSGTVRQNILFGQPMDRRRYDLVVRKCALERDF-ELLP 545
            :.|             ::....|||.||:.|:..|:|.|.|...|...:.|.|.|...|| |.:|
 Worm   490 IDGTDVRELNIEWLRNTVGIVQQEPILFNDTIHNNLLIGNPGSTRETMIEVCKMANAHDFIEKMP 554

  Fly   546 LKDKTILGDRGASLSGGQKARISLARSVYRDASIYLLDDPLSAVDSSVARRLFEECLRGHLRDKI 610
            ....|::||.|..||||||.|:::||::.||..:.|||:..||:|:. :..:.:..|....:.:.
 Worm   555 KGYDTLIGDGGVQLSGGQKQRVAIARTLIRDPKVLLLDEATSALDAQ-SESIVQSALNNASKGRT 618

  Fly   611 VILVTHQLQFLQQADQIVIMEMGKVKAVGTYESLHK-SGLDFGIVLDDPVN-DNEAAED-RSRTS 672
            .|::.|:|..:::||:||..|.|.:...|.:|.|.: .|..|.:|...... |.||.|: .....
 Worm   619 TIMIAHRLSTIREADKIVFFEKGVIVEAGNHEELVRLGGRYFDLVKAQQFKADPEATEEFEEEEI 683

  Fly   673 SITDQRRSSVKSVLSHAESCPEDVGEEQKIN-------------LQRQQLGRNGLGV-------- 716
            .:.|..|||.:|.::.|.|..|.......:|             .:......|...:        
 Worm   684 DLDDTSRSSRRSSMTSARSGSEAFRRGNSLNDSFSGSKRSAQADAENSAFAANEAAIMAEDGQIT 748

  Fly   717 --YVDYFRAGGGFLSFSVVMTFFVCSQGLASLGDYFLSPWVSRNEKMVAHNYTTDAKDADFEMHA 779
              |:|.|:...|...:..:.|.|...:||.......:..||......|.:....        ||.
 Worm   749 AGYLDIFKNAKGNYLYMFLGTVFALIRGLELPALALIFGWVFEGFTFVPYGGRM--------MHR 805

  Fly   780 AYIYMLITVLSIMV-----TIKRSFLFF----NLAMRASIQLHNSMFRGISRASMYFFNKNPA-- 833
            ..: .:|...|:.|     .:..|.||.    ||:||..:|    .||.:......:|: |||  
 Worm   806 MAM-AVIAFASVGVGVWFSQLASSVLFAVVSENLSMRFRVQ----SFRNLLYQDASYFD-NPAHA 864

  Fly   834 -GSILNRFSKD-----------MGQVDEMLPTIIMTVIQDFL------LFGGNIIVIAIVNPLFL 880
             |.::.|.:.|           |.||...|..||..:...|:      :.|.::|::.    .|:
 Worm   865 PGKLITRLASDAPNIKAVVDARMLQVIYALAAIIANIAIAFIYCWQIGILGTSLILLL----AFV 925

  Fly   881 IPALAFGIVIYYLRSFY--------LKTSLDVKRLEASTRSPVYSHFAASLNGLSTIRAFGAGSI 937
            :..||:.|.:..:....        ::...:||.::..||..::                     
 Worm   926 MIGLAYKISLMNVEQIQNDDAGRIAIEIIENVKTIQLLTRCELF--------------------- 969

  Fly   938 LEAEFDGYQ-------------DMHSSASYMFISTSRAFAYWMDIFCVLFIAMITLSFFIFPPSS 989
                ||.||             .|..:.:|   |.:::|.|:|  .|..:...|.:   |:....
 Worm   970 ----FDHYQTSSKQQKRSELKKGMIEAINY---SLTQSFMYFM--MCFTYAVGIRI---IYQGDK 1022

  Fly   990 AADVGLAITQAMGLTGTVQWTVRQSAELENTMISVERMIEYEEIEPEGPLEATADKKPHE----- 1049
            ::|.......|| :.|.|  .|..||:.....:..:        ...|.|.....:||..     
 Worm  1023 SSDDTFKGIIAM-MLGAV--AVMNSAQYFPEFVKAK--------TAAGMLFNIIYRKPRTGDLME 1076

  Fly  1050 -SWPE-QGKIEFVELSLRYEPYLKSESVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRL-SY 1111
             ..|| :|.|.|..:...| |....:.::|.|.:.....:.|.:||.:|:|||:.|..|.|. ..
 Worm  1077 GDRPEIRGNILFENVKFSY-PQRPLQPIMKGLQWTALRGQTVALVGPSGSGKSTNIGMLERFYDV 1140

  Fly  1112 NDGSVRIDDKDTNDMGLHDLRSKISIIPQEPVLFSGTVRHNL------DPFDEYSDDRLWCALEE 1170
            ..|::|||.:|...:.|..||::::::.|||.||:||:|.|:      .|.::.:.     |||.
 Worm  1141 TGGALRIDGQDIRKLSLFHLRTQMALVGQEPRLFAGTIRENVCLGLKDVPLEKINQ-----ALEL 1200

  Fly  1171 VELKDVVASVATGLETKITEGGSNFSVGQRQLVCLARAILRDNRILVMDEATANVDPQTDALIQA 1235
            ......:|::..|::|.:.|.|...|.||:|.:.:|||::||.:||::||||:.:|.:::..:|.
 Worm  1201 ANANRFLANLPAGIDTDVGEKGGQLSGGQKQRIAIARALVRDPKILLLDEATSALDSESERAVQE 1265

  Fly  1236 TIRNKFRECTVLTVAHRLHTIMDSDRVLVMDAGRVVEFGTPYELLTADDTNAFQDLVKQ 1294
            .:.......|.:|:||||.:|.:||.::.:|.|:|.|.|...:|:  .....:..|:|:
 Worm  1266 ALDRAREGRTCITIAHRLSSIQNSDLIVYIDKGKVQEAGNHTQLM--HQKGRYYKLIKK 1322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31792NP_001260548.1 CFTR_protein 12..1281 CDD:273530 315/1344 (23%)
ABC_membrane 94..360 CDD:294371 59/303 (19%)
ABCC_MRP_domain1 434..634 CDD:213217 67/213 (31%)
ABC_membrane 736..980 CDD:294371 57/293 (19%)
ABCC_MRP_domain2 1055..1276 CDD:213211 74/227 (33%)
pgp-14NP_510128.1 PTZ00265 104..1321 CDD:240339 311/1344 (23%)
ABC_membrane 109..377 CDD:279056 55/290 (19%)
ABC_MTABC3_MDL1_MDL2 429..666 CDD:213216 74/237 (31%)
ABC_membrane 769..1039 CDD:294371 63/321 (20%)
ABC_MTABC3_MDL1_MDL2 1086..1323 CDD:213216 76/245 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.