DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31792 and haf-3

DIOPT Version :9

Sequence 1:NP_001260548.1 Gene:CG31792 / 35163 FlyBaseID:FBgn0051792 Length:1323 Species:Drosophila melanogaster
Sequence 2:NP_506927.2 Gene:haf-3 / 180056 WormBaseID:WBGene00001813 Length:666 Species:Caenorhabditis elegans


Alignment Length:557 Identity:144/557 - (25%)
Similarity:239/557 - (42%) Gaps:94/557 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   779 AAYIYMLITVLSIMVTIKRSFLFFNLAMRASIQLHNSMFRGISRASMYFFNKNPAGSILNRFSKD 843
            ||.||.:.|...:::.                .|..|:|..:.|..|.||:||..|.|::|.|.|
 Worm   155 AARIYCMHTAGQLVIN----------------DLRKSVFNSVLRQDMAFFDKNKVGEIVSRLSTD 203

  Fly   844 ---------MGQVDEMLPTIIMTVIQDFLLFG-GNIIV---IAIVNPLFLIPALAFGIVIYYLRS 895
                     |...|.....|        ..|| |.::|   :|:...:|::..:..|....: ..
 Worm   204 ALIVGYSVSMNLSDGARALI--------TCFGSGGLMVYTSLAMCKVIFVVVPVIVGTFAVF-GK 259

  Fly   896 FYLKTSLDVKRLEASTRSPVYSHFAASLNGLSTIRAFGAGSILEAEFDGYQDMHSSASYMFISTS 960
            ...|.:|.::...|......    ...|:.:.|:|...|.   ..|...|.|..:  ....||..
 Worm   260 LQRKYTLMMQEAVAGANQVA----TERLSSVRTVRMLVAE---RKELAAYSDKIN--EIWQISKK 315

  Fly   961 RAFAYWMDIFCVLFIAMITLSFFIFPPSSAADVGL------------AITQAMGLTGTVQWTVRQ 1013
            ...|.........|...:.||..:|..|:....||            |:..|..|:....:.:  
 Worm   316 EGLAKGFMFGSFQFTGYLALSSILFYGSNLISQGLLTYGELSSFCLYAVLSAGSLSAMSGFYL-- 378

  Fly  1014 SAELENTMISVERMIEYEEIEPEGPLEATADKKPHESWPEQGKIEFVELSLRYE----PYLKSES 1074
              ||...:.:..|:.|.:..||..|||...            :|..|:.::|:|    .|...:.
 Worm   379 --ELMKGLGASSRLFELKNREPRIPLEGGV------------QIGNVKDTIRFEHVAFGYADRDP 429

  Fly  1075 VLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYN--DGSVRIDDKDTNDMGLHDLRSKISI 1137
            :..::||.:...:...:||.:|:|||::.:.|.|| |:  .|.:.:|..|..|:.....|..|..
 Worm   430 LFHNISFDVPAGKITAVVGSSGSGKSTIASLLLRL-YDPTSGRILVDGTDLKDIDPSYWRRHIGT 493

  Fly  1138 IPQEPVLFSGTVRHN-----LDPFDEYSDDRLWCALEEVELKDVVASVATGLETKITEGGSNFSV 1197
            :.|||||||.|::.|     |:| :..:|..:..|.::....:.::......:||:.|.||..|.
 Worm   494 VGQEPVLFSTTIKENIIYGSLEP-ENVTDAEIVSAADQSNADEFISRFPIKYDTKVGEHGSTLSG 557

  Fly  1198 GQRQLVCLARAILRDNRILVMDEATANVDPQTDALIQATIRNKF---RECTVLTVAHRLHTIMDS 1259
            ||:|.:.:|||::....||:|||||:.:|..::.|::..: ||.   .:.||:.:||||.||..:
 Worm   558 GQKQRIAIARALVNKPNILIMDEATSALDASSEYLVRIAL-NKLLANSKQTVMIIAHRLSTIKHA 621

  Fly  1260 DRVLVMDAGRVVEFGTPYELLTADDTNAFQDLV-KQT 1295
            |:::|:|.|.|.|.|:..||:...| ..|:.|| |||
 Worm   622 DQIVVVDRGSVAESGSYDELIAIPD-GIFRKLVEKQT 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31792NP_001260548.1 CFTR_protein 12..1281 CDD:273530 137/540 (25%)
ABC_membrane 94..360 CDD:294371
ABCC_MRP_domain1 434..634 CDD:213217
ABC_membrane 736..980 CDD:294371 43/213 (20%)
ABCC_MRP_domain2 1055..1276 CDD:213211 74/234 (32%)
haf-3NP_506927.2 MdlB 70..657 CDD:224055 142/555 (26%)
ABC_membrane 96..366 CDD:279056 50/244 (20%)
P-loop_NTPase 415..656 CDD:304359 78/244 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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