DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swip-1 and Efhd1

DIOPT Version :10

Sequence 1:NP_609925.1 Gene:Swip-1 / 35158 FlyBaseID:FBgn0032731 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_083165.1 Gene:Efhd1 / 98363 MGIID:1921607 Length:240 Species:Mus musculus


Alignment Length:210 Identity:116/210 - (55%)
Similarity:140/210 - (66%) Gaps:14/210 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DSPS----------STTNTDSSELTHILNRRQEIMESQEAGIEVRRTYKVVNVYTDFPEFSRNQI 71
            |:|:          :.|.:..|||...|:||.:|.:    |.......||.|.||:||||||..:
Mouse    33 DAPAGHPEPEPPARAPTASADSELNLKLSRRLDIHQ----GTARPGRSKVFNPYTEFPEFSRRLL 93

  Fly    72 KDYQKTFNTYDTARDGFLDLQELKFMMEKLGAPQTHLGLKQMIAEVDEDNDGKISFREFLLIFRK 136
            ||.:|.|.|||..||||:||.|||.|||||||||||||||.||.|||||.|||:|||||||||.|
Mouse    94 KDLEKMFKTYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKSMIKEVDEDFDGKLSFREFLLIFHK 158

  Fly   137 AQAGELDSDSGLNQLARLTEVDVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEERRREEEE 201
            |.||||..||||..||:.:|:||...||.|||||||||.:....::||..|::||||||:||||.
Mouse   159 AAAGELQEDSGLLALAKFSEIDVALEGVRGAKNFFEAKAQALSCSSKFEAELKAEQEERKREEEA 223

  Fly   202 RAQRRQQFQQRAAIF 216
            |..|:..|::..|.|
Mouse   224 RRLRQAAFRELKAAF 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Swip-1NP_609925.1 EFh 73..131 CDD:238008 44/57 (77%)
Efhd1NP_083165.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..54 3/20 (15%)
EFh 95..153 CDD:238008 44/57 (77%)

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