DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swip-1 and efhd2

DIOPT Version :10

Sequence 1:NP_609925.1 Gene:Swip-1 / 35158 FlyBaseID:FBgn0032731 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001011261.1 Gene:efhd2 / 496711 XenbaseID:XB-GENE-954641 Length:202 Species:Xenopus tropicalis


Alignment Length:201 Identity:112/201 - (55%)
Similarity:137/201 - (68%) Gaps:10/201 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TDSSELTHILNRRQEIMESQEAGIEVRRT--------YKVVNVYTDFPEFSRNQIKDYQKTFNTY 81
            || .||...||||.. ||.........:|        .:|.|.||:|.||||.||||.:|.|..:
 Frog     3 TD-DELASRLNRRLR-MEDDGGDTTPEQTRRREQSPCMRVFNPYTEFKEFSRKQIKDMEKMFRQF 65

  Fly    82 DTARDGFLDLQELKFMMEKLGAPQTHLGLKQMIAEVDEDNDGKISFREFLLIFRKAQAGELDSDS 146
            |...|||:||.|||.|||||||||||||||.||.|||||.|||:||||||||||||.||||:.||
 Frog    66 DAGHDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGELEEDS 130

  Fly   147 GLNQLARLTEVDVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEERRREEEERAQRRQQFQQ 211
            ||:.||||:|:||...||.|||.|||||::.....::|..||:|||||::|:.||:.||:..|::
 Frog   131 GLHALARLSEIDVSIEGVKGAKCFFEAKVQAINHGSRFEQEIKAEQEEKKRQAEEKEQRKAAFKE 195

  Fly   212 RAAIFQ 217
            ..:.|:
 Frog   196 LQSAFK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Swip-1NP_609925.1 EFh 73..131 CDD:238008 41/57 (72%)
efhd2NP_001011261.1 EFh 57..115 CDD:238008 41/57 (72%)

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