DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swip-1 and efhd1

DIOPT Version :10

Sequence 1:NP_609925.1 Gene:Swip-1 / 35158 FlyBaseID:FBgn0032731 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_989300.1 Gene:efhd1 / 394919 XenbaseID:XB-GENE-5738953 Length:236 Species:Xenopus tropicalis


Alignment Length:207 Identity:117/207 - (56%)
Similarity:146/207 - (70%) Gaps:5/207 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SNKDSVDSPSSTTNTDSSELTHILNRRQEIMESQEAGIEV-RRTYKVVNVYTDFPEFSRNQIKDY 74
            ||:.........|::..|||:..|||||:|    .||..| ....||.|.||:|.||||.||||.
 Frog    32 SNEQHNGEEKEATSSADSELSAKLNRRQDI----NAGNAVPANRGKVFNPYTEFKEFSRKQIKDM 92

  Fly    75 QKTFNTYDTARDGFLDLQELKFMMEKLGAPQTHLGLKQMIAEVDEDNDGKISFREFLLIFRKAQA 139
            :..|..||:.:|||:|:.||||:||||||||||||||.||.|||||.|.|::||||||||.||.|
 Frog    93 EAMFKKYDSGKDGFIDMMELKFLMEKLGAPQTHLGLKNMIKEVDEDFDNKLNFREFLLIFHKAAA 157

  Fly   140 GELDSDSGLNQLARLTEVDVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEERRREEEERAQ 204
            |||:.||||..||:|:|:||:..||.|||||||||::....::||..|||||||||:|:|||:..
 Frog   158 GELEEDSGLLALAKLSEIDVDVEGVKGAKNFFEAKVQALSSSSKFEAEIRAEQEERKRQEEEKKN 222

  Fly   205 RRQQFQQRAAIF 216
            ||..|::..:.|
 Frog   223 RRAAFKELKSAF 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Swip-1NP_609925.1 EFh 73..131 CDD:238008 38/57 (67%)
efhd1NP_989300.1 EFh 91..149 CDD:238008 38/57 (67%)

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