DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10431 and Repin1

DIOPT Version :9

Sequence 1:NP_001286078.1 Gene:CG10431 / 35157 FlyBaseID:FBgn0032730 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001073372.2 Gene:Repin1 / 58887 MGIID:1889817 Length:601 Species:Mus musculus


Alignment Length:626 Identity:108/626 - (17%)
Similarity:184/626 - (29%) Gaps:264/626 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 VGQSERLQPGRTANEMLQNELLTEEHNYAKEEWQLPPHQYKTEKVEGTDAAPDAAPPPADPPPLQ 345
            ||:|.|..|                .|..:..|:.|..|..:.:.|             :.|.|:
Mouse    24 VGRSSRSLP----------------RNIPRRSWKKPHPQLFSLQAE-------------EEPMLE 59

  Fly   346 DNIDPPSAPEPRSCKP-IVTNVSQIPNPMICELLPQP----------APPTSIKPNIVVLNDSVV 399
            .....|:|..|  .:| :.:..||..:        ||          |.|....|.         
Mouse    60 QRCRGPTAMGP--AQPWLFSGPSQESS--------QPDRGLRYQGKSAQPRGQTPG--------- 105

  Fly   400 ESSAAFRLHNCTLCTAKF------------------ITIDSLNQHYAHS---------HSNSTPM 437
                  ::|.|..|..:|                  :.....||.:.|:         |:::.|.
Mouse   106 ------KVHRCAHCRKRFPGWVALWLHARRCQARLPLPCHECNQRFRHAPFLALHLQVHASAVPD 164

  Fly   438 VSVPPMNICLPSLTMNPPMKMESNRGLVATEQSEYWPLEWHNSPVSKQPRKKIDILDMQSSFLHH 502
            :..    ||        .:...|.||.||.    ...|..|::  ||:|   |...:....|...
Mouse   165 LGF----IC--------HLCGHSFRGWVAL----VLHLRAHSA--SKRP---ITCPECDRRFWRQ 208

  Fly   503 KDLIPTATQLSAPAPDPQLVAVTASYAKLANRYRKLQLKCKKLKSPRKVHRKTYVCRMCRKGFSK 567
            |.|.....:...|.|:                                  .:.::|..|.:.|::
Mouse   209 KQLRAHLRRCQPPVPE----------------------------------ARPFICGNCGRSFAQ 239

  Fly   568 FKNLHHHRR-------QKAHFVKLIPNFSGR----------------CSGCLKFFRSRLGLRQHM 609
            :..|..|:|       ::|....|.|...||                |:.|.|.||.:..|..|.
Mouse   240 WDQLVVHKRVHVAEALEEAAAKALGPRPRGRPAAPRPGGDAVDRPFQCACCGKRFRHKPNLIAHR 304

  Fly   610 R-------YICQSLS--------LKNHRRLQS----FKCRHC------QAIAFAHWRLYRR---- 645
            |       :.|....        |.:|||:.:    :.|..|      :....:|.::::|    
Mouse   305 RVHTGERPHQCPECGKRFTNKPYLTSHRRIHTGEKPYPCTECGRRFRHKPNLLSHSKIHKRLEVS 369

  Fly   646 ---------HELNCRP------------KKSKTKVQTAMNS-----------------KKKVTPT 672
                     |::...|            .::..:....::|                 :::.|..
Mouse   370 AQAAPHPESHQIAAEPMAQPALGVPLGSPRTPAEAPALLHSCSDCGRSFRLERFLRLHQRQHTGE 434

  Fly   673 QVFECNICKKSFGSLNGLRQHNITHSTERQHKCGICERVFKRRNGLSQHIKGY------------ 725
            :.|.|..|.|:||....|..|:..||.||...|..|.|.|.:.:.|:.|.:.:            
Mouse   435 RPFACTECGKNFGKKTHLVAHSRVHSGERPFACEECGRRFSQGSHLAAHRRDHAPERPFVCPDCG 499

  Fly   726 ---------------HLQLKPHECPVCQHRYALKCDMLRCR 751
                           |...||:.||.|...::.|.:::..|
Mouse   500 KAFRHKPYLAAHRRIHTGEKPYVCPDCGKAFSQKSNLVSHR 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10431NP_001286078.1 THAP 4..81 CDD:283206
zf-AD 123..192 CDD:214871
zf-C2H2_6 674..700 CDD:290623 10/25 (40%)
C2H2 Zn finger 677..697 CDD:275368 7/19 (37%)
C2H2 Zn finger 705..726 CDD:275368 6/47 (13%)
Repin1NP_001073372.2 C2H2 Zn finger 110..130 CDD:275368 3/19 (16%)
C2H2 Zn finger 138..158 CDD:275368 3/19 (16%)
C2H2 Zn finger 169..189 CDD:275368 7/31 (23%)
C2H2 Zn finger 198..216 CDD:275368 3/17 (18%)
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
C2H2 Zn finger 287..307 CDD:275368 8/19 (42%)
zf-H2C2_2 299..324 CDD:290200 4/24 (17%)
COG5048 <303..574 CDD:227381 41/238 (17%)
C2H2 Zn finger 315..335 CDD:275368 5/19 (26%)
zf-H2C2_2 327..352 CDD:290200 6/24 (25%)
C2H2 Zn finger 343..363 CDD:275368 3/19 (16%)
C2H2 Zn finger 411..431 CDD:275368 0/19 (0%)
zf-H2C2_2 424..446 CDD:290200 5/21 (24%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
zf-H2C2_2 451..476 CDD:290200 10/24 (42%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
C2H2 Zn finger 495..515 CDD:275368 0/19 (0%)
zf-H2C2_2 507..532 CDD:290200 6/24 (25%)
C2H2 Zn finger 523..543 CDD:275368 5/18 (28%)
zf-H2C2_2 535..560 CDD:290200 1/6 (17%)
C2H2 Zn finger 551..571 CDD:275368
C2H2 Zn finger 579..599 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24406
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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