DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10431 and Repin1

DIOPT Version :10

Sequence 1:NP_609924.2 Gene:CG10431 / 35157 FlyBaseID:FBgn0032730 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001385832.1 Gene:Repin1 / 445541 RGDID:1549707 Length:607 Species:Rattus norvegicus


Alignment Length:579 Identity:101/579 - (17%)
Similarity:176/579 - (30%) Gaps:234/579 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 SAPEPRSC-KPIVTNVS----QIPNPMICELLPQPAP--------PTSIKP-------------- 389
            |....|.| :.|..|:.    :.|:|.:|.|..:..|        ||::.|              
  Rat    23 SVGRSRRCSRSIPRNIPRRSWKKPHPQLCSLQAEEEPMLERRCRGPTAMGPAHPWLFSGPSQESS 87

  Fly   390 ----NIVVLNDSVVE--SSAAFRLHNCTLCTAKF------------------ITIDSLNQHYAHS 430
                .:.....||.:  ..|..::|.|..|..:|                  :.....||.:.|:
  Rat    88 QPNRGLRYQGKSVAQPGGPAPVKVHRCAHCRKRFPGWVALWLHTRRCQARLPLPCHECNQRFRHA 152

  Fly   431 ---------HSNSTPMVSVPPMNICLPSLTMNPPMKMESNRGLVATEQSEYWPLEWHNSPVSKQP 486
                     |:::.|.:..    ||        .:...|.||.||.    ...|..|::  ||:|
  Rat   153 PFLALHLQVHASAVPDLGF----IC--------HLCGHSFRGWVAL----VLHLRAHSA--SKRP 199

  Fly   487 RKKIDILDMQSSFLHHKDLIPTATQLSAPAPDPQLVAVTASYAKLANRYRKLQLKCKKLKSPRKV 551
               |...:....|...|.|.....:...|||:                                 
  Rat   200 ---ITCPECNKRFWRQKQLRAHLRRCQPPAPE--------------------------------- 228

  Fly   552 HRKTYVCRMCRKGFSKFKNLHHHRR-------QKAHFVKLIPNFSGR------------------ 591
             .:.::|..|.:.|:::..|..|:|       ::|....|.|...||                  
  Rat   229 -ARPFICGNCGRSFAQWDQLVVHKRVHVAEALEEAAAKALGPRPRGRPSVTAPRPGGDAVDRPFQ 292

  Fly   592 CSGCLKFFRSRLGLRQHMR-------YICQSLS--------LKNHRRLQS----FKCRHC----- 632
            |:.|.|.||.:..|..|.|       :.|....        |.:|||:.:    :.|..|     
  Rat   293 CACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRFTNKPYLTSHRRIHTGEKPYPCTECGRRFR 357

  Fly   633 -QAIAFAHWRLYRRHELNCR-----------------------------PKKSKTKVQTAMN--- 664
             :....:|.::::|.|::.:                             |.::...:.:..:   
  Rat   358 HKPNLLSHSKIHKRSEVSAQAASHTGSHLIAAEPMAQPALGVPLGSLRTPAEAPASLHSCTDCGR 422

  Fly   665 ----------SKKKVTPTQVFECNICKKSFGSLNGLRQHNITHSTERQHKCGICERVFKRRNGLS 719
                      .:::.|..:.|.|..|.|:||....|..|:..||.||...|..|.|.|.:.:.|:
  Rat   423 SFRLERFLRLHQRQHTGERPFTCTECGKNFGKKTHLVAHSRVHSGERPFACEECGRRFSQGSHLA 487

  Fly   720 QHIKGY---------------------------HLQLKPHECPVCQHRYALKCDMLRCR 751
            .|.:.:                           |...||:.||.|...::.|.:::..|
  Rat   488 AHRRDHAPERPFVCPDCGKAFRHKPYLAAHRRIHTGEKPYVCPDCGKAFSQKSNLVSHR 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10431NP_609924.2 THAP 5..81 CDD:461662
zf-AD 123..192 CDD:214871
SFP1 <665..727 CDD:227516 19/88 (22%)
zf-C2H2_6 674..697 CDD:433576 8/22 (36%)
C2H2 Zn finger 677..697 CDD:275368 7/19 (37%)
C2H2 Zn finger 705..726 CDD:275368 6/47 (13%)
Repin1NP_001385832.1 C2H2 Zn finger 114..134 CDD:275368 3/19 (16%)
C2H2 Zn finger 142..162 CDD:275368 3/19 (16%)
C2H2 Zn finger 173..193 CDD:275368 7/31 (23%)
COG5048 <193..367 CDD:227381 38/212 (18%)
C2H2 Zn finger 202..222 CDD:275368 3/19 (16%)
C2H2 Zn finger 234..254 CDD:275368 6/19 (32%)
C2H2 Zn finger 293..313 CDD:275368 8/19 (42%)
COG5048 <309..580 CDD:227381 40/238 (17%)
C2H2 Zn finger 321..341 CDD:275368 5/19 (26%)
C2H2 Zn finger 349..369 CDD:275368 3/19 (16%)
C2H2 Zn finger 417..437 CDD:275368 0/19 (0%)
C2H2 Zn finger 445..465 CDD:275368 7/19 (37%)
C2H2 Zn finger 473..493 CDD:275368 6/19 (32%)
C2H2 Zn finger 501..521 CDD:275368 0/19 (0%)
C2H2 Zn finger 529..549 CDD:275368 5/18 (28%)
C2H2 Zn finger 557..577 CDD:275368
C2H2 Zn finger 585..605 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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