DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10431 and Thap1

DIOPT Version :10

Sequence 1:NP_609924.2 Gene:CG10431 / 35157 FlyBaseID:FBgn0032730 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001008341.1 Gene:Thap1 / 306547 RGDID:1307589 Length:210 Species:Rattus norvegicus


Alignment Length:229 Identity:61/229 - (26%)
Similarity:100/229 - (43%) Gaps:34/229 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAHCAVINCSHKYVHAGSISFHRFPFKRKDLLQKWKEFTQRSAQWMPSKWSALCSRHFGDEDFN 65
            |...|:...|.::|.....:|||:||..|..|.::| |...|...:.|:|:|::||.||..:.|.
  Rat     1 MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKQW-EAAVRRKNFKPTKYSSICSEHFTPDCFK 64

  Fly    66 CSNNRKTLKKNAVPSIRV-SEDDSMSGHLE--QVSPSNRPTHKQTLSSAAESAATGVKATCRFCG 127
            ...|.|.||:||||:|.: .|.......||  :..||..|...|.      .||.|:.....   
  Rat    65 RECNNKLLKENAVPTIFLYIEPHEKKEELEPQEQLPSPSPPTSQV------DAAVGLLMPPL--- 120

  Fly   128 SSAINCSSF-DKSFELFGMIQKCFPTLQILQDDTLPKEICQECCLQLE-RFSQFIDVVMLAQSEL 190
            .:..|.|.| |.::.:               :||:.:   ::..|.|| :..:....:..||...
  Rat   121 QTPDNLSVFCDHNYTV---------------EDTMHQ---RKRILHLEQQVEKLRKKLKTAQQRC 167

  Fly   191 QRKYRRQLKIKQ-EPLVRVKQEACESLDNLFPDE 223
            :|:.|:..|:|: ....|.|.:|.|....:.|::
  Rat   168 RRQERQLEKLKEVVHFQREKDDASERGYVILPND 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10431NP_609924.2 THAP 5..81 CDD:461662 29/75 (39%)
zf-AD 123..192 CDD:214871 11/70 (16%)
SFP1 <665..727 CDD:227516
zf-C2H2_6 674..697 CDD:433576
C2H2 Zn finger 677..697 CDD:275368
C2H2 Zn finger 705..726 CDD:275368
Thap1NP_001008341.1 THAP 4..82 CDD:214951 30/78 (38%)
HCFC1-binding motif (HBM). /evidence=ECO:0000250 131..134 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.