DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and AT3G56840

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001319771.1 Gene:AT3G56840 / 824851 AraportID:AT3G56840 Length:465 Species:Arabidopsis thaliana


Alignment Length:483 Identity:146/483 - (30%)
Similarity:212/483 - (43%) Gaps:101/483 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VRLLVQGLRR--SLLNV---------GVAAPNESTATHKRSQHSSSSCGDYDLVVVGGGIVGAAS 57
            :||..:.|:.  :|:||         |::...|:.|..:           .|.||:|.|:||.|.
plant    41 MRLSTRNLKPTWNLINVVDASKTIVRGISGGAETIAKER-----------VDTVVIGAGVVGLAV 94

  Fly    58 AREIVLRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGTLKARLCVEGMHLAYAYLDEKK 122
            |||:.||  ..:|.:|:.........|..||.|:||||||.|.:|||:.||.|..|.|.|..|.:
plant    95 ARELSLR--GREVLILDAASSFGTVTSSRNSEVVHAGIYYPPNSLKAKFCVRGRELLYKYCSEYE 157

  Fly   123 IPYKKTGKLIVATDEKEVKLLKDLEKRGIANNVPDLRMIEGSEIQEIEPYCQGVMALHSPHTGIV 187
            ||:||.|||||||...|:..|..|...|..|.|..|||:||.|...:||..:.|.||.||.:||:
plant   158 IPHKKIGKLIVATGSSEIPKLDLLMHLGTQNRVSGLRMLEGFEAMRMEPQLRCVKALLSPESGIL 222

  Fly   188 D-----WGLVTEHYGQDFKQCGGDIYLDFNV-----------SKFTETKEGTDYPVTIHGAKPGQ 236
            |     ..||.|............:.|:..|           ::|:|::...:          .|
plant   223 DTHSFMLSLVGEAQNNHATFSYNTVVLNGRVEEKKMHLYVADTRFSESRCEAE----------AQ 277

  Fly   237 TVRTKN-VLTCGGLQSDLLAEKT-GCPRDPRIVP----FRGEYLLLTKEKQHMVKGNIYPVPDPR 295
            .....| |:...||.:..||::. |.  |.|.||    .||.|..|:..|.......:||:|:. 
plant   278 LELIPNLVVNSAGLGAQALAKRLHGL--DHRFVPSSHYARGCYFTLSGIKAPPFNKLVYPIPEE- 339

  Fly   296 FPFLGVHFTPRMDGSIWLGPNAVLALKREGYTW----GDINLF-ELFDALRYPGFVKMASKYIGF 355
             ..||||.|..::|.:..||:.         .|    .|.:.| ..||....|            
plant   340 -GGLGVHVTVDLNGLVKFGPDV---------EWIECTDDTSSFLNKFDYRVNP------------ 382

  Fly   356 GLSEMSKSWFINLQIKALQKYIPDITEYDIQRGPAGVRAQAMDLDG--NLVDDFVFDRGQGSGAL 418
               :.|:.::     ..::||.||:.:..::.|.:|:|.:   |.|  ....|||....:..|  
plant   383 ---QRSEKFY-----PEIRKYYPDLKDGSLEPGYSGIRPK---LSGPKQSPADFVIQGEETHG-- 434

  Fly   419 AKRVLHCRNAPSPGATSSLAIAKMIADK 446
            ...:::.....|||.|||||||:.||:|
plant   435 VPGLVNLFGIESPGLTSSLAIAEHIANK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 130/420 (31%)
AT3G56840NP_001319771.1 DAO 7..>132 CDD:477422 32/103 (31%)
LhgO 76..463 CDD:440344 138/448 (31%)

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