DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and L2HGDH

DIOPT Version :9

Sequence 1:NP_001286076.1 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_079160.1 Gene:L2HGDH / 79944 HGNCID:20499 Length:463 Species:Homo sapiens


Alignment Length:424 Identity:236/424 - (55%)
Similarity:308/424 - (72%) Gaps:10/424 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SSSCGDYDLVVVGGGIVGAASAREIVLRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGT 101
            |:|...:|:|:|||||||.||||.::||||||.:.|||||..||.||:||||||||:||||||.:
Human    43 SASTSSFDIVIVGGGIVGLASARALILRHPSLSIGVLEKEKDLAVHQTGHNSGVIHSGIYYKPES 107

  Fly   102 LKARLCVEGMHLAYAYLDEKKIPYKKTGKLIVATDEKEVKLLKDLEKRGIANNVPDLRMIEGSEI 166
            |||:|||:|..|.|.|..:|.|.||:.||||||.:::|:..|:.|.::|:.|.||.||:|:..:|
Human   108 LKAKLCVQGAALLYEYCQQKGISYKQCGKLIVAVEQEEIPRLQALYEKGLQNGVPGLRLIQQEDI 172

  Fly   167 QEIEPYCQGVMALHSPHTGIVDWGLVTEHYGQDFKQCGGDIYLDFNVSKFTETKE-------GTD 224
            ::.||||:|:||:..|||||||:..|...:.|||::.||.:..:|.|......||       |..
Human   173 KKKEPYCRGLMAIDCPHTGIVDYRQVALSFAQDFQEAGGSVLTNFEVKGIEMAKESPSRSIDGMQ 237

  Fly   225 YPVTIHGAKPGQTVRTKNVLTCGGLQSDLLAEKTGCPRDPRIVPFRGEYLLLTKEKQHMVKGNIY 289
            ||:.|...| |:.:|.:.|:||.||.||.::|.:||..|||||||||:||||..||.::||||||
Human   238 YPIVIKNTK-GEEIRCQYVVTCAGLYSDRISELSGCTPDPRIVPFRGDYLLLKPEKCYLVKGNIY 301

  Fly   290 PVPDPRFPFLGVHFTPRMDGSIWLGPNAVLALKREGYTWGDINLFELFDALRYPGFVKMASKYIG 354
            ||||.||||||||||||||||||||||||||.|||||...|.:..::.|.:...|.:|:||:...
Human   302 PVPDSRFPFLGVHFTPRMDGSIWLGPNAVLAFKREGYRPFDFSATDVMDIIINSGLIKLASQNFS 366

  Fly   355 FGLSEMSKSWFINLQIKALQKYIPDITEYDIQRGPAGVRAQAMDLDGNLVDDFVFDRGQGSGALA 419
            :|::||.|:.|:...:|.|||:||:||..||.||||||||||:|.|||||:|||||.|.|.  :.
Human   367 YGVTEMYKACFLGATVKYLQKFIPEITISDILRGPAGVRAQALDRDGNLVEDFVFDAGVGD--IG 429

  Fly   420 KRVLHCRNAPSPGATSSLAIAKMIADKIENEFSI 453
            .|:||.||||||.||||:||:.||||:::..|.:
Human   430 NRILHVRNAPSPAATSSIAISGMIADEVQQRFEL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_001286076.1 PRK11728 56..447 CDD:183292 224/397 (56%)
NADB_Rossmann 69..440 CDD:304358 209/377 (55%)
L2HGDHNP_079160.1 NADB_Rossmann 31..448 CDD:304358 231/411 (56%)
PRK11728 61..457 CDD:183292 224/402 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140710
Domainoid 1 1.000 467 1.000 Domainoid score I466
eggNOG 1 0.900 - - E1_COG0579
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11767
Inparanoid 1 1.050 478 1.000 Inparanoid score I1492
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61343
OrthoDB 1 1.010 - - D1310154at2759
OrthoFinder 1 1.000 - - FOG0005741
OrthoInspector 1 1.000 - - oto89275
orthoMCL 1 0.900 - - OOG6_101318
Panther 1 1.100 - - LDO PTHR43104
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2601
SonicParanoid 1 1.000 - - X4135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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