DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and Dmgdh

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_083048.1 Gene:Dmgdh / 74129 MGIID:1921379 Length:869 Species:Mus musculus


Alignment Length:386 Identity:77/386 - (19%)
Similarity:158/386 - (40%) Gaps:76/386 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 STATHKRSQHSSSSCGDY----DLVVVGGGIVGAASAREIVLRHPSLKVAVLEKECKLAKHQSGH 86
            |:|..:..|.|.:|..::    :.|::|||.||.:.|..  |....::..||.::.:|....:.|
Mouse    22 SSAGLREGQESPASPPEWKDRAETVIIGGGCVGVSLAYH--LAKAGMRDVVLMEKSELTAGSTWH 84

  Fly    87 NSGVIHAGIYYKPGTLKARLCVEGMHLAYAYLDEKK---IPYKKTGKLIVATDEKEVKLLKDLEK 148
            .:|:.   .|:.||....::..:.:.| |..|:|:.   :.:.:.|.:.:||....|...|....
Mouse    85 AAGLT---TYFHPGINLKKIHYDSIKL-YERLEEETGQVVGFHQPGSIRLATTPVRVDEFKYQMT 145

  Fly   149 RGIAN-NVPDLRMIEGSEIQEIEPY--CQGVMA-LHSPHTGIVDWGLVTEHYGQDFKQCGGDIYL 209
            |  .| :..:..:||..:|.|:.|.  ...::| |::|..|.:|...:|.......::.|..:..
Mouse   146 R--TNWHATEQYIIEPEKIHELFPLLNMNKILAGLYNPGDGHIDPYSLTMALAAGARKYGALLKY 208

  Fly   210 DFNVSKFTETKEGTDYPVTIHGAKPGQTVRTKNVLTCGGLQSDLLAEKTGCPRDPRIVPFRGEYL 274
            ...|:......:||....|     |..:||...::...|..:..:.:..|.  |..::|.:.:|:
Mouse   209 PAPVTSLKPRPDGTWDVET-----PQGSVRANRIVNAAGFWAREVGKMIGL--DHPLIPVQHQYV 266

  Fly   275 LLTKEKQHMVKGNIYPVPDPR-----FPFLGVHFTPRMDGSIWLGPNAVLALKREGYTWGDINLF 334
            :.:            .:|:.:     .|.|     ..::||.:      |..:|:|..:|.....
Mouse   267 VTS------------TIPEVKALKRELPVL-----RDLEGSYY------LRQERDGLLFGPYESQ 308

  Fly   335 ELFDALRYPGFVKMASKYI------GFGL----SEMSKSWFINLQIKALQKYIPDITEYDI 385
            |.         :|:.:.::      |||.    |::.:   |:..::|..:.||.:.:.||
Mouse   309 EK---------MKLQASWVTHGVPPGFGKELFESDLDR---ISDHLEAAMEMIPVLKKADI 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 66/352 (19%)
DmgdhNP_083048.1 DadA 42..424 CDD:440429 72/366 (20%)
FAO_M 410..465 CDD:465100
GcvT 481..850 CDD:440173
Blue background indicates that the domain is not in the aligned region.

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