DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and l2hgdh

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001139067.1 Gene:l2hgdh / 566872 ZFINID:ZDB-GENE-090319-6 Length:452 Species:Danio rerio


Alignment Length:434 Identity:239/434 - (55%)
Similarity:314/434 - (72%) Gaps:14/434 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TATHKRSQHSSSSCGDYDLVVVGGGIVGAASAREIVLRHPSLKVAVLEKECKLAKHQSGHNSGVI 91
            :||.:.:.||    |.:|:.::||||||.|||||::||||:|..|:||||.:||.||:|||||||
Zfish    26 SATCRAAHHS----GSFDVAIIGGGIVGLASARELILRHPNLSFALLEKEKELALHQTGHNSGVI 86

  Fly    92 HAGIYYKPGTLKARLCVEGMHLAYAYLDEKKIPYKKTGKLIVATDEKEVKLLKDLEKRGIANNVP 156
            |.||||.||:|||:|||.|..|||.|..:|.:||.:.||||||.|.:|:..||.|.:||..|||.
Zfish    87 HTGIYYTPGSLKAQLCVRGATLAYEYCQKKGVPYNRCGKLIVAVDREEIPRLKALYERGQKNNVR 151

  Fly   157 DLRMIEGSEIQEIEPYCQGVMALHSPHTGIVDWGLVTEHYGQDFKQCGGDIYLDFNVSKFT---- 217
            |||:|:...|:|.||||:|:|||.||:||||||..|...||:||::.||.:..|:..|..:    
Zfish   152 DLRLIDAKAIREKEPYCRGIMALDSPYTGIVDWREVALAYGKDFQEAGGTVMTDYEASDMSVAAE 216

  Fly   218 ---ETKEGTDYPVTIHGAKPGQTVRTKNVLTCGGLQSDLLAEKTGCPRDPRIVPFRGEYLLLTKE 279
               ::..|..||:.|..:: |:.||...||.||||.||.|:|.:||..:||||||||:||:|..|
Zfish   217 SQADSTNGQKYPIIIRSSQ-GKEVRCAFVLACGGLYSDRLSEMSGCSSEPRIVPFRGDYLVLKPE 280

  Fly   280 KQHMVKGNIYPVPDPRFPFLGVHFTPRMDGSIWLGPNAVLALKREGYTWGDINLFELFDALRYPG 344
            |.::|:|||||||:|||||||||||||||||:|||||||||.|||||...|.:..:..:||.:.|
Zfish   281 KNYLVRGNIYPVPNPRFPFLGVHFTPRMDGSVWLGPNAVLAFKREGYKLFDFDAQDFVNALSFSG 345

  Fly   345 FVKMASKYIGFGLSEMSKSWFINLQIKALQKYIPDITEYDIQRGPAGVRAQAMDLDGNLVDDFVF 409
            ..::..|.:.:|:.|:.:..|...|:|.|||:||:::..|:.|||:||||||:|.:|||||||||
Zfish   346 LQRLVMKNVVYGVGEIYRGVFPGAQVKILQKFIPELSPSDVIRGPSGVRAQALDAEGNLVDDFVF 410

  Fly   410 DRGQGSGALAKRVLHCRNAPSPGATSSLAIAKMIADKIENEFSI 453
            |.|:|.  |..||||.||||||.|:||||||:||||::|..|.:
Zfish   411 DGGKGE--LGSRVLHVRNAPSPAASSSLAIAEMIADELEKRFQL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 225/397 (57%)
l2hgdhNP_001139067.1 DAO 38..446 CDD:477422 232/410 (57%)

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