DRSC/TRiP Functional Genomics Resources

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Protein Alignment L2HGDH and C15B12.8

DIOPT Version :10

Sequence 1:NP_609923.2 Gene:L2HGDH / 35156 FlyBaseID:FBgn0032729 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_741814.2 Gene:C15B12.8 / 259861 WormBaseID:WBGene00015788 Length:385 Species:Caenorhabditis elegans


Alignment Length:459 Identity:96/459 - (20%)
Similarity:166/459 - (36%) Gaps:152/459 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YDLVVVGGGIVGAASAREIVLRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGTLKARLC 107
            ||::|||.||.|:.:|..  .:...|:..:||      ::..||::|..|.         |:|: 
 Worm     6 YDVIVVGAGIFGSCTAYH--CQRLGLRTLLLE------QYSLGHSNGSSHG---------KSRI- 52

  Fly   108 VEGMHLAYAYLDEKKIPYKKTGKLIVATDEKEVKLLKDLEKRG--IANNVPDLRMIEGSEIQEIE 170
                 :.||:.|.:.:|.  .|...:..:|.|       :|||  :.|.:..|....|:::..| 
 Worm    53 -----IRYAHTDPEYVPL--VGDSYLQIEELE-------KKRGEKLWNKLGLLWAATGNQVDSI- 102

  Fly   171 PYCQGVMALHSPHTGIVDWGLVTEHYGQDFK----------QCGGDIYLDFNVSKFTE---TKEG 222
               .|.:..|:....::....:||.|.| ||          ..||.||.:..:..|.|   |..|
 Worm   103 ---SGHLKKHNIDHEVLPGTKITERYPQ-FKFDDKWTALIDPMGGVIYANKWLKAFQEEFITLGG 163

  Fly   223 T---DYPVTIHGAKPGQTVRTKNVLTCGGLQSDLLAEKTGC------PRDPRIVPFRGEYLLLT- 277
            |   :.||..:|......|..|.  :.|..:::.:....||      |.    |.|:.:.:.|. 
 Worm   164 TIQDNEPVISYGETDNVIVNVKT--STGEYKTNKIIFTVGCWITKFFPN----VNFQIKPISLAV 222

  Fly   278 -------KEKQHMVKGNIYPVPDPRFPFLGVHFTPRMDGSIWLGPNAVLA--LKREGYTWGDINL 333
                   ::..|::....:||                          |:|  |:::.|      .
 Worm   223 CYWNAKDEKNNHLLDEKHFPV--------------------------VIAKNLEKKEY------F 255

  Fly   334 FELFDALRYPGFVKMA---SKYIGFGLSEMSKS--WFINLQIKALQKYIPDI---TEYDIQR--- 387
            |.|.|. .|||.:|:.   ...:...||..:|:  ..:.:....::.:||.|   :.|.:.:   
 Worm   256 FALPDT-DYPGAIKLVLDEGDDLAGDLSHPTKNNQELVTIPGSFIKDHIPVIDGSSPYKVDQCKY 319

  Fly   388 ----------GPAGVRAQAMDLDGNLVDDFVFDRGQGSGALAKRVLHCRNAPSPGATSSLAIAKM 442
                      ||.......:.:.|         .|.|||        .:.||..|.    ::|:|
 Worm   320 TNSPDHHYLIGPVSSENSKILVGG---------CGSGSG--------FKTAPGIGR----SLAEM 363

  Fly   443 IADK 446
            .|.|
 Worm   364 AAGK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L2HGDHNP_609923.2 DAO 56..447 CDD:477422 88/446 (20%)
C15B12.8NP_741814.2 soxA_mon 6..384 CDD:130444 96/459 (21%)

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