DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10623 and metr-1

DIOPT Version :9

Sequence 1:NP_001286073.1 Gene:CG10623 / 35153 FlyBaseID:FBgn0032727 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_496353.1 Gene:metr-1 / 174681 WormBaseID:WBGene00010988 Length:1249 Species:Caenorhabditis elegans


Alignment Length:337 Identity:77/337 - (22%)
Similarity:141/337 - (41%) Gaps:47/337 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ILVKCGGFSSQLAKNVTEKVD--GD-------PLWGSR--FDATNPEAVIQTHLDFLRNGADIIL 67
            |::..|...:.:.:...|:.|  |:       ||.|:.  ...|.|:.:.:.|..:|..|||.:.
 Worm    18 IMIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEAGADFVE 82

  Fly    68 TNTYQSSVEGFVKYLGVTRERGV-ELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGA 131
            |||:..:......|   ..|..| |:..:|..:|::|    ..::|: |......:.|:|||...
 Worm    83 TNTFSGTTIAQADY---RCEHLVHEINYQSALVARRA----CDDVGA-ATGRRRYVCGAIGPTNR 139

  Fly   132 YLHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNF--- 193
            .|.............::.:||...:..:....:..|||.|.:||:.....|:|....:...|   
 Worm   140 TLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLLVETVFDSANAKAALFAIRTLFEDE 204

  Fly   194 --PDAKFWVSLQCMDEKHMA----SGENFAEAALSLWRLVQSRKAENRLLGIGLNC-VNPLFVTP 251
              |:...::|...:|.....    :||.|         ||.::  :.:.:.:|||| :....:..
 Worm   205 GVPEMPVFLSGTIVDMSGRTLSGQTGEAF---------LVSTK--QGKPMAVGLNCALGAKDMRQ 258

  Fly   252 LLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEEVVKFVPEWIQLG-VRIVGGCCRVYPT 315
            .:.:::|.:.|.   ::.|.|.|  .....|.:..|.||:...:.|:.:.| |.|:||||...|.
 Worm   259 FVDNMSKWSDSF---IICYPNAG--LPNALGGYDETPEEMADVLREFARDGLVNIIGGCCGTTPD 318

  Fly   316 DVLAIRKYVDGL 327
            .:.|:.|.|.|:
 Worm   319 HINAMYKAVQGI 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10623NP_001286073.1 S-methyl_trans 9..322 CDD:304616 74/330 (22%)
metr-1NP_496353.1 metH 1..1245 CDD:236539 77/337 (23%)
MetH1 3..329 CDD:223719 76/334 (23%)
MeTr 360..615 CDD:238381
methionine_synthase_B12_BD 661..886 CDD:239020
Met_synt_B12 954..1230 CDD:281030
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0646
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518534at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2187
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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