DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10621 and metr-1

DIOPT Version :9

Sequence 1:NP_001286071.1 Gene:CG10621 / 35152 FlyBaseID:FBgn0032726 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_496353.1 Gene:metr-1 / 174681 WormBaseID:WBGene00010988 Length:1249 Species:Caenorhabditis elegans


Alignment Length:365 Identity:80/365 - (21%)
Similarity:142/365 - (38%) Gaps:100/365 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RVLVKDGGFGTQMTVHVGDSVD--GD-------PLWSAR--FNATNPAAIISTHLDFLQNGADII 58
            |:::.||..||.:.....:..|  |:       ||....  .:.|.|..|...|..:|:.|||.:
 Worm    17 RIMIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEAGADFV 81

  Fly    59 LTNTYQSSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYP-------- 115
            .|||:..:.....:|                |..|:..|..    ||:.|..:....        
 Worm    82 ETNTFSGTTIAQADY----------------RCEHLVHEIN----YQSALVARRACDDVGAATGR 126

  Fly   116 --LIIASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIE-----------ACLEAGVDALA 167
              .:..:|||           |.......|:.|..|:..|..:           :.::.|||.|.
 Worm   127 RRYVCGAIGP-----------TNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLL 180

  Fly   168 IETIPCQMEAEA---LVEMLCDD--YPDVKFWVAFQCKDEN--TLA--HGETFADAANAIWDLLA 223
            :||:.....|:|   .:..|.:|  .|::..:::....|.:  ||:  .||.|         |::
 Worm   181 VETVFDSANAKAALFAIRTLFEDEGVPEMPVFLSGTIVDMSGRTLSGQTGEAF---------LVS 236

  Fly   224 ERNAQDKCLAIGVNCV-----HPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVNGWQGRE 283
            .:  |.|.:|:|:||.     ..:||..:.|..:..        ::.|||:| :.:.:.|:.  |
 Worm   237 TK--QGKPMAVGLNCALGAKDMRQFVDNMSKWSDSF--------IICYPNAG-LPNALGGYD--E 288

  Fly   284 HCVPLANYVPEWAQLG-AKVIGGCCRTYARDIRHIGEAIR 322
            ....:|:.:.|:|:.| ..:|||||.|....|..:.:|::
 Worm   289 TPEEMADVLREFARDGLVNIIGGCCGTTPDHINAMYKAVQ 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10621NP_001286071.1 mmuM 5..323 CDD:181899 80/365 (22%)
metr-1NP_496353.1 metH 1..1245 CDD:236539 80/365 (22%)
MetH1 3..329 CDD:223719 80/365 (22%)
MeTr 360..615 CDD:238381
methionine_synthase_B12_BD 661..886 CDD:239020
Met_synt_B12 954..1230 CDD:281030
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0646
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518534at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2187
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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