Protein Alignment tup and LOC799481

DIOPT Version :10

• Sequence 1: NP_476775.1
• Gene: tup / 35147
• FlyBaseID: FBgn0003896
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: XP_009302150.4
• Gene: LOC799481 / 799481
• -ID: -
• Length: 356
• Species: Danio rerio
• Alignment Length: 247
• Identity: 84/247 - (34%)
• Similarity: 120/247 - (48%)
• Gaps: 42/247 - (17%)

  Fly    54 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVRLFGTKCDK 118
            |..|...|.|:::|:| .|:.|||.||.|..|:..|.|..||:||:.:.:||..|.|.|.|.|..
Zfish    86 CTRCREHILDRHLLKV-NDMCWHARCLSCSVCQTTLSEQTTCYVREREIFCKLHYFRRFQTWCSC 149

  Fly   119 CGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAG-ALYCKEDH-DVLEKSSQSS 181
            |..:...:|:|.|||..::|:.||.|.:|.|||..|:||||  .| .|.|:..: .:|:|.::.:
Zfish   150 CRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGEEFAL--VGEKLLCRIHYSSMLDKLNRPA 212

  Fly   182 LTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRDKRPSGPSDGKPTRVRT 246
            ....||.....::                       :|.|      |:.|    ||    .|.||
Zfish   213 EKGKSVSPEKALA-----------------------AGCE------IKQK----PS----KRART 240

  Fly   247 VLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKK 298
            .....||..::..:..:..|||.|.:.|.|.|.||.|||:|||||.|.:.||
Zfish   241 SFTADQLQVMQAQFVQDNNPDAQMLQSLAEQTGLSRRVIQVWFQNCRARHKK 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tup	NP_476775.1	LIM1_Isl	54..108	CDD:188752	22/53 (42%)
		LIM2_Isl	116..171	CDD:188760	23/55 (42%)
		HOX	241..297	CDD:197696	23/55 (42%)
LOC799481	XP_009302150.4	None