Protein Alignment tup and ftz

DIOPT Version :10

• Sequence 1: NP_476775.1
• Gene: tup / 35147
• FlyBaseID: FBgn0003896
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Alignment Length: 276
• Identity: 69/276 - (25%)
• Similarity: 98/276 - (35%)
• Gaps: 70/276 - (25%)

  Fly   169 EDHDVLEKSSQSS---------------LTSSSVESNNNISSSNNNNTNLSNNNHSSELG----- 213
            ||.|.|:..|..|               .|.:|:.....||:...:....|::..|.|:.
  Fly   166 EDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVT 230

  Fly   214 SMSDSGSESGSHKSIRDKRPSGPSDGKP-----TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 273
            :.:.:|..:.||  |.:...|...|.|.     ||.:|:..||:.|..|  |....|     :..
  Fly   231 APNGAGDFNWSH--IEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNR--YITRRR-----RID 286

  Fly   274 LVEMTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPL 338
            :....|||.|.|::||||:|.|.||   ...|....|..|  .||.||.. |:.|:|.....:|
  Fly   287 IANALSLSERQIKIWFQNRRMKSKK---DRTLDSSPEHCG--AGYTAMLP-PLEATSTATTGAP- 344

  Fly   339 NLQGLDVQTYQPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYD-LNGMPILPPH---- 398
               .:.|..|.                 :.......||:..  :..|||. ||..|....|
  Fly   345 ---SVPVPMYH-----------------HHQTTAAYPAYSH--SHSHGYGLLNDYPQQQTHQQYD 387

  Fly   399 --PHSHPAQGPPHQHP 412
              |..:..|....|||
  Fly   388 AYPQQYQHQCSYQQHP 403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tup	NP_476775.1	LIM1_Isl	54..108	CDD:188752
		LIM2_Isl	116..171	CDD:188760	1/1 (100%)
		HOX	241..297	CDD:197696	20/60 (33%)
ftz	NP_477498.1	FTZ	1..248	CDD:397787	17/83 (20%)
		Homeodomain	255..311	CDD:459649	21/62 (34%)
		KLF1_2_4_N	<321..404	CDD:425360	25/109 (23%)