Protein Alignment tup and Dfd

DIOPT Version :10

• Sequence 1: NP_476775.1
• Gene: tup / 35147
• FlyBaseID: FBgn0003896
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Alignment Length: 243
• Identity: 56/243 - (23%)
• Similarity: 78/243 - (32%)
• Gaps: 80/243 - (32%)

  Fly   317 GYGAMQGIP-------MIASSPVRHDSPLNLQGLDVQTYQPPWKALSDFALHADLDSNGAINTHT 374
            |.|.|.|.|       |::.....|.:|.:..  ...|:..|..           .||.||:.|.
  Fly    69 GAGGMTGHPHSMHPADMVSDYMAHHHNPHSHS--HSHTHSLPHH-----------HSNSAISGHH 120

  Fly   375 PAFQQLVNQMHGYDLNGMPILPP-HPHSHPAQGPPHQHPPPPGGPHNHQNQQPNQQPGGSSLDSG 438
            .|      ...||..|.....|| |||||     ||.||        ||:             .|
  Fly   121 QA------SAGGYSSNYANATPPSHPHSH-----PHAHP--------HQS-------------LG 153

  Fly   439 ITSHH----------HPDSTDSYVTYLESDDKSKLALTPSSSSSASAGTS--------ISSPPSG 485
            ...||          |.|.|:.|         ...|..|::|:....|.|        :....:|
  Fly   154 YYVHHAPEFISAGAVHSDPTNGY---------GPAANVPNTSNGGGGGGSGAVLGGGAVGGSANG 209

  Fly   486 VGAGGGGAVGGGSGVLGLGVVANQSATEQLMQMLQKVTGSASPASHAV 533
            ...|.||..|..:|.:|.......|...|:|.:..:.:.:..|.:.|:
  Fly   210 YYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTAL 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tup	NP_476775.1	LIM1_Isl	54..108	CDD:188752
		LIM2_Isl	116..171	CDD:188760
		HOX	241..297	CDD:197696
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649