Protein Alignment tup and Awh

DIOPT Version :10

• Sequence 1: NP_476775.1
• Gene: tup / 35147
• FlyBaseID: FBgn0003896
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_001261379.1
• Gene: Awh / 38451
• FlyBaseID: FBgn0013751
• Length: 287
• Species: Drosophila melanogaster
• Alignment Length: 340
• Identity: 110/340 - (32%)
• Similarity: 146/340 - (42%)
• Gaps: 86/340 - (25%)

  Fly    48 KQRLSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVRLF 112
            |..|..|..||..|.|::.|.|. ...|||.||:|..|...||...:||:|:.:.|||.||.:.|
  Fly     2 KTELRSCAACGEPISDRFFLEVG-GCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNF 65

  Fly   113 GTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKEDHDVLEKS 177
            |.||.||....|.:|:|.||:..:||:.||.|..|.|||..|::|||.|...| ||..:  ||
  Fly    66 GAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVL-CKAHY--LE-- 125

  Fly   178 SQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSE-SGSHKSIRDKRPSGPSDGKP 241
                    :||...                      :.||.|.: .|.|||            |.
  Fly   126 --------TVEGGT----------------------TSSDEGCDGDGYHKS------------KT 148

  Fly   242 TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKKKTIQMKLQ 306
            .||||...|:||..|:..:..:..||....|::..:|.||.||.:|||||.|.:.||.....|.:
  Fly   149 KRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213

  Fly   307 MQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY------QPPWKALSDFALHADLD 365
            : :|.||               ||..||   :|||    .||      |.|        :|.:..
  Fly   214 I-REPEG---------------SSFARH---INLQ----LTYSFQNNAQNP--------MHLNGS 247

  Fly   366 SNGAINTHTPAFQQL 380
            ..|...||..:..:|
  Fly   248 KAGLYPTHESSMDEL 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tup	NP_476775.1	LIM1_Isl	54..108	CDD:188752	22/53 (42%)
		LIM2_Isl	116..171	CDD:188760	25/54 (46%)
		HOX	241..297	CDD:197696	22/55 (40%)
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759	22/53 (42%)
		LIM2_AWH	69..123	CDD:188765	25/54 (46%)
		Homeodomain	149..205	CDD:459649	22/55 (40%)