DRSC/TRiP Functional Genomics Resources

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Protein Alignment tup and en

DIOPT Version :10

Sequence 1:NP_476775.1 Gene:tup / 35147 FlyBaseID:FBgn0003896 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster


Alignment Length:179 Identity:47/179 - (26%)
Similarity:68/179 - (37%) Gaps:59/179 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 SSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELG---------------------------- 213
            ||.||:.:||..|::..||:.::    .|::.||.||                            
  Fly   339 SSTSSVATSSSSSSSGCSSAASS----LNSSPSSRLGASGSGVNASSPQPQPIPPPSAVSRDSGM 399

  Fly   214 -SMSDSGSESGS------------------------HKSIRDKRPSGPSD--GKPTRVRTVLNEK 251
             |..|:.||:||                        ....|.:||..|.|  ....|.||..:.:
  Fly   400 ESSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSE 464

  Fly   252 QLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKKKT 300
            ||..|:..:|.|.......::||.....|:...|::||||||.|.||.|
  Fly   465 QLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKST 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tupNP_476775.1 LIM1_Isl 54..108 CDD:188752
LIM2_Isl 116..171 CDD:188760
HOX 241..297 CDD:197696 19/55 (35%)
enNP_523700.2 Homeodomain 455..511 CDD:459649 19/55 (35%)
Engrail_1_C_sig 512..542 CDD:431338 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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