DRSC/TRiP Functional Genomics Resources

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Protein Alignment tup and eve

DIOPT Version :10

Sequence 1:NP_476775.1 Gene:tup / 35147 FlyBaseID:FBgn0003896 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster


Alignment Length:364 Identity:87/364 - (23%)
Similarity:118/364 - (32%) Gaps:134/364 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 SNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIRDKRPSGPSDGKPTRVRTVLNEKQL 253
            |.|...||.:|:.|.|.             |||.             |:|....|.||.....||
  Fly    44 SPNECLSSPDNSLNGSR-------------GSEI-------------PADPSVRRYRTAFTRDQL 82

  Fly   254 HTL-----RTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEKEG 313
            ..|     :..|.:.||     :.:|....:|....|:|||||:|.|||::.|.:...       
  Fly    83 GRLEKEFYKENYVSRPR-----RCELAAQLNLPESTIKVWFQNRRMKDKRQRIAVAWP------- 135

  Fly   314 RKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTYQPPWKALSDFALHADLDSNGAINTHTPAFQ 378
                |.|:...|..|:|.::  :..|..|:....|.|  .|.:..|..|.:.:|..:.|..|.. 
  Fly   136 ----YAAVYSDPAFAASILQ--AAANSVGMPYPPYAP--AAAAAAAAAAAVATNPMMATGMPPM- 191

  Fly   379 QLVNQMHGYDLNGMPILP-------------PHPHSH----PAQGPPHQHPPPPGGPHNHQNQQP 426
                        |||.:|             |.|:..    |...|....||.|.|||       
  Fly   192 ------------GMPQMPTMQMPGHSGHAGHPSPYGQYRYTPYHIPARPAPPHPAGPH------- 237

  Fly   427 NQQPGGSSLDSGITSHHHPDSTDSYVTYLESDDKSKLALTPSSSSSASAGTSISSPPSGVGAGGG 491
                           .|||....|..|                .||.|||          .||..
  Fly   238 ---------------MHHPHMMGSSAT----------------GSSYSAG----------AAGLL 261

  Fly   492 GAVGGGSGVLGLGVVANQSATEQLMQMLQKVTGSASPAS 530
            ||:...:...||||...::.|..|     .:..|:||.|
  Fly   262 GALPSATCYTGLGVGVPKTQTPPL-----DLQSSSSPHS 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tupNP_476775.1 LIM1_Isl 54..108 CDD:188752
LIM2_Isl 116..171 CDD:188760
HOX 241..297 CDD:197696 19/60 (32%)
eveNP_523670.2 Homeodomain 71..127 CDD:459649 20/60 (33%)
Blue background indicates that the domain is not in the aligned region.

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