Protein Alignment tup and al

DIOPT Version :10

• Sequence 1: NP_476775.1
• Gene: tup / 35147
• FlyBaseID: FBgn0003896
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_722629.1
• Gene: al / 33208
• FlyBaseID: FBgn0000061
• Length: 408
• Species: Drosophila melanogaster
• Alignment Length: 329
• Identity: 78/329 - (23%)
• Similarity: 111/329 - (33%)
• Gaps: 89/329 - (27%)

  Fly   218 SGSESGSHKSIRDKRPSGPSD---------GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 273
            ||:..|::..:.|    |.||         .|..|.||.....||..|...::....||...:|:
  Fly    57 SGASGGTNSPVSD----GNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE 117

  Fly   274 LVEMTSLSPRVIRVWFQNKRCKDKKKTIQMKLQMQQEKEGRKL---------GYGAMQGI--PMI 327
            |.....|:...|:|||||:|.|.:|          |||.|.:.         |...||.:  ..:
  Fly   118 LAMKIGLTEARIQVWFQNRRAKWRK----------QEKVGPQSHPYNPYLPGGAATMQTVVGAAL 172

  Fly   328 ASSPVRH-----DSPLNLQ-GLDVQTYQPPWKALSDFALHADLDS----------NGAINTHTP- 375
            ..:|..|     ..|.:.| ..::..::.|..:.:........:.          :|....::|
  Fly   173 PPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPS 237

  Fly   376 -AFQQLVNQM----HGYDLNGMPIL---------PPH----PHSHPAQG-------PPHQHPPPP 415
             :||.|:..|    .|..|...|.|         |.|    |.:.||.|       .|..|||||
  Fly   238 SSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAHPPPP 302

  Fly   416 GGPHNHQNQQPNQQPGGSSLDSGITSHHHPDSTDSYVTYLESDDKSKLALTPSSSSSASAGTSIS 480
                    |.|.|.|.|.........|....:.....:.|.....|.:|||.|.|.....
  Fly   303 --------QAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQL----- 354

  Fly   481 SPPS 484
            .|||
  Fly   355 PPPS 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tup	NP_476775.1	LIM1_Isl	54..108	CDD:188752
		LIM2_Isl	116..171	CDD:188760
		HOX	241..297	CDD:197696	19/55 (35%)
al	NP_722629.1	Homeodomain	86..142	CDD:459649	19/55 (35%)
		OAR	374..391	CDD:461067