Protein Alignment tup and CG11294

DIOPT Version :10

• Sequence 1: NP_476775.1
• Gene: tup / 35147
• FlyBaseID: FBgn0003896
• Length: 534
• Species: Drosophila melanogaster
• Sequence 2: NP_572500.1
• Gene: CG11294 / 31807
• FlyBaseID: FBgn0030058
• Length: 261
• Species: Drosophila melanogaster
• Alignment Length: 315
• Identity: 68/315 - (21%)
• Similarity: 102/315 - (32%)
• Gaps: 110/315 - (34%)

  Fly   243 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKKKTIQMKLQM 307
            |.||....:||..|...:.....||..::|::....|||...::|||||:|.|.:|   |.:||:
  Fly    26 RNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRK---QARLQL 87

  Fly   308 QQEKEGRK---------LGYGAMQ---GIPMIASSPVRHDSPLNLQGLDVQTYQPPWKALSDFAL 360
            .|:....:         :|.||:|   |....|..|  ..:|.||......         |:.|.
  Fly    88 LQDAWRMRCLSLGTPPVMGGGAVQGGSGNGATARPP--SQTPENLSSASKD---------SELAE 141

  Fly   361 HADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPILPPHPHSHPAQGPPHQHPPPPGGPHNHQNQQ 425
            ..:..::|:.....|||||                                      .|..|..|
  Fly   142 VGNGPNSGSFTMMHPAFQQ--------------------------------------QHQQQQHQ 168

  Fly   426 PNQQPGGSSLDSGITSHHHPDSTDSYVTYLESDDKSKLALTPSSSSSASAGTSISSPPSGVGAGG 490
            .:||                           :.|:.||:.|.:......|      |..|:..||
  Fly   169 GHQQ---------------------------ATDQDKLSKTYTELKLYKA------PSHGMELGG 200

  Fly   491 GGAVGGGSG-------------VLGLGVVANQSATEQLMQMLQKVTGSASPASHA 532
            ..|:.|.|.             ..|..:..:||:..|..|..|:..|:...|..|
  Fly   201 MAALSGHSDEGSDGSDSEEIDLTSGACIDFSQSSKLQQQQQQQQQQGTQGAAGSA 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tup	NP_476775.1	LIM1_Isl	54..108	CDD:188752
		LIM2_Isl	116..171	CDD:188760
		HOX	241..297	CDD:197696	19/53 (36%)
CG11294	NP_572500.1	Homeodomain	29..81	CDD:459649	17/51 (33%)