DRSC/TRiP Functional Genomics Resources

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Protein Alignment tup and isl2b

DIOPT Version :9

Sequence 1:NP_001286068.1 Gene:tup / 35147 FlyBaseID:FBgn0003896 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_571039.1 Gene:isl2b / 30151 ZFINID:ZDB-GENE-990415-133 Length:358 Species:Danio rerio


Alignment Length:375 Identity:209/375 - (55%)
Similarity:244/375 - (65%) Gaps:46/375 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LDCHGHDVIKKQRLSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKT 102
            ||..|....||..|:.|||||.||||||||||:||||||||||||.||.|:|||:||||||||||
Zfish    11 LDDMGDHSKKKSGLAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKT 75

  Fly   103 YCKRDYVRLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYC 167
            |||||||||||.||.||...||.:|.||||:..::||||||||.|:|||||||||::||. .|.|
Zfish    76 YCKRDYVRLFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDE-ELLC 139

  Fly   168 KEDHDV-LEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGS-ESGSHKSIRD 230
            :.||.: ||:....|..|                   ..|.|:..|...:|..| ....|::...
Zfish   140 RADHGLALERGPGGSPLS-------------------PGNIHTRGLHMAADPVSVRQTPHRNHVH 185

  Fly   231 KRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCK 295
            |:..     |.|||||||||||||||||||||||||||||||||||||.||||||||||||||||
Zfish   186 KQSE-----KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCK 245

  Fly   296 DKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTYQPPWKALSDFAL 360
            |||::|.|| |:||: .|.|.....|.|..::|.||:||:..:....:|||.|||||||||:|||
Zfish   246 DKKRSILMK-QLQQQ-HGDKTNLQGMTGTALVAGSPIRHNPSVPGHPVDVQAYQPPWKALSEFAL 308

  Fly   361 HADLDSNGAINTHTPAFQQLVN--------QMHGYDLNGMPI-LPPHPHS 401
            .:|||.        |||||||:        ...|.|:..:.. ||..|:|
Zfish   309 QSDLDQ--------PAFQQLVSFSESGSLGNSSGSDVTSLSSQLPDTPNS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tupNP_001286068.1 LIM1_Isl 54..108 CDD:188752 47/53 (89%)
LIM2_Isl 116..171 CDD:188760 32/54 (59%)
HOX 241..297 CDD:197696 53/55 (96%)
isl2bNP_571039.1 LIM1_Isl 27..81 CDD:188752 47/53 (89%)
LIM2_Isl2 89..143 CDD:188855 32/54 (59%)
HOX 191..247 CDD:197696 53/55 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..358 6/26 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595530
Domainoid 1 1.000 126 1.000 Domainoid score I5343
eggNOG 1 0.900 - - E33208_3BAXJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 403 1.000 Inparanoid score I1876
OMA 1 1.010 - - QHG45829
OrthoDB 1 1.010 - - D403874at33208
OrthoFinder 1 1.000 - - FOG0002096
OrthoInspector 1 1.000 - - otm25849
orthoMCL 1 0.900 - - OOG6_105408
Panther 1 1.100 - - O PTHR24204
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1777
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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