DRSC/TRiP Functional Genomics Resources

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Protein Alignment tup and isl1a

DIOPT Version :9

Sequence 1:NP_001286068.1 Gene:tup / 35147 FlyBaseID:FBgn0003896 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_571037.1 Gene:isl1a / 30147 ZFINID:ZDB-GENE-980526-112 Length:349 Species:Danio rerio


Alignment Length:367 Identity:211/367 - (57%)
Similarity:253/367 - (68%) Gaps:47/367 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KKQRLSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVRL 111
            ||:.:|.|||||.||||||||||:||||||||||||.||.|:||||||||||||||||||||:||
Zfish    10 KKRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 74

  Fly   112 FGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKEDHDVLEK 176
            :|.||.||...||||||||||::|::|||||||.||:|||:||||||||:.| |:|:.||||:|:
Zfish    75 YGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDG-LFCRADHDVVER 138

  Fly   177 SSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR---DKRPSGPSD 238
            ::..:                  ...||..:.:..|...::  ..|....::|   .|:|.    
Zfish   139 ATMGA------------------GDPLSPLHPARPLQMAAE--PISARQPALRPHVHKQPE---- 179

  Fly   239 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKKKTIQM 303
             |.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||::|.|
Zfish   180 -KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSILM 243

  Fly   304 KLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTYQPPWKALSDFALHADLDSNG 368
            | |:||::...|.....|.|.||:|:||.|||..|....::||:||||||.||||||.:|:|.  
Zfish   244 K-QLQQQQPNDKTNIQGMTGTPMVATSPERHDGGLQANQVEVQSYQPPWKVLSDFALQSDIDQ-- 305

  Fly   369 AINTHTPAFQQLVNQMH---GYDLNGMPI------LPPHPHS 401
                  ||||||||...   |.:..|..:      ||..|:|
Zfish   306 ------PAFQQLVNFSEGGPGSNSTGSEVASMSSQLPDTPNS 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tupNP_001286068.1 LIM1_Isl 54..108 CDD:188752 48/53 (91%)
LIM2_Isl 116..171 CDD:188760 37/54 (69%)
HOX 241..297 CDD:197696 53/55 (96%)
isl1aNP_571037.1 LIM1_Isl 17..71 CDD:188752 48/53 (91%)
LIM2_Isl 79..133 CDD:188760 37/54 (69%)
HOX 181..237 CDD:197696 53/55 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 312..349 8/30 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595529
Domainoid 1 1.000 126 1.000 Domainoid score I5343
eggNOG 1 0.900 - - E33208_3BAXJ
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1661
Inparanoid 1 1.050 403 1.000 Inparanoid score I1876
OMA 1 1.010 - - QHG45829
OrthoDB 1 1.010 - - D403874at33208
OrthoFinder 1 1.000 - - FOG0002096
OrthoInspector 1 1.000 - - otm25849
orthoMCL 1 0.900 - - OOG6_105408
Panther 1 1.100 - - O PTHR24204
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5473
SonicParanoid 1 1.000 - - X1777
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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