DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and APE2

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_012765.3 Gene:APE2 / 853699 SGDID:S000001640 Length:952 Species:Saccharomyces cerevisiae


Alignment Length:694 Identity:170/694 - (24%)
Similarity:266/694 - (38%) Gaps:164/694 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKILLDVRDINVTNATLLAGGS 144
            |:....||.:...|..|..:.||...|.:|||....|:....:|.:.|:..|.::.:|.:    .
Yeast    97 PNREILPDNVVPLHYDLTVEPDFKTFKFEGSVKIELKINNPAIDTVTLNTVDTDIHSAKI----G 157

  Fly   145 ELPINFFISDAVDDIGQKLTLELPSGTA---KGS--LNVRIDYETSSSASGLQWLNPTQTLGKEH 204
            ::..:..||   ::..|..|...|.||.   ||:  |:::.....:.:.:|.........|..|.
Yeast   158 DVTSSEIIS---EEEQQVTTFAFPKGTMSSFKGNAFLDIKFTGILNDNMAGFYRAKYEDKLTGET 219

  Fly   205 PYM-FSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSALIDKK----EPGK--TLFKQ 262
            .|| .:|.:...||...||.|.|.:|.::..|:.....||.|.:  :|.|    :.||  |||..
Yeast   220 KYMATTQMEPTDARRAFPCFDEPNLKASFAITLVSDPSLTHLSN--MDVKNEYVKDGKKVTLFNT 282

  Fly   263 EVPIPAYLVAIAIGKL--------------VSRPLGENSSVWAEEAIVDACAEEFSETATMLKTA 313
            ...:..||||..:.:|              .:.|..|....:|.:......| .|.:|..:    
Yeast   283 TPKMSTYLVAFIVAELKYVESKNFRIPVRVYATPGNEKHGQFAADLTAKTLA-FFEKTFGI---- 342

  Fly   314 TELCGPYVWKQYDLLVMP----PSFPFGGMEN-PCLTF-VTPTLLAGDKS-------LADVVAHE 365
                      ||.|..|.    ..|..|.||| ..:|: |...||..|.|       :|:||.||
Yeast   343 ----------QYPLPKMDNVAVHEFSAGAMENWGLVTYRVVDLLLDKDNSTLDRIQRVAEVVQHE 397

  Fly   366 IAHSWTGNLVTNKNFEHFWLNEGFTVFV---------------ESKIVGRMQGAKELDFKMLSNL 415
            :||.|.|||||...:|..||||||..::               |..:...:|.|..||....|: 
Yeast   398 LAHQWFGNLVTMDWWEGLWLNEGFATWMSWYSCNEFQPEWKVWEQYVTDTLQHALSLDSLRSSH- 461

  Fly   416 TDLQECIRTQLNKTPELTKLVVDLSNCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDY 480
                 .|...:.|..|:.::            |.::.|.||::.||.:....|..| |...:..|
Yeast   462 -----PIEVPVKKADEINQI------------FDAISYSKGASLLRMISKWLGEET-FIKGVSQY 508

  Fly   481 LKKYAYKSIETKDFQSALYDYFIDTDKKDKLSAVDWDLWLKSEGMP------------------- 526
            |.|:.|.:.:|:|    |:|...|...||..|.:  ::|.|..|.|                   
Yeast   509 LNKFKYGNAKTED----LWDALADASGKDVRSVM--NIWTKKVGFPVISVSEDGNGKITFRQNRY 567

  Fly   527 ----PVIPNFDES-----LANVTK---ELASLWSSKS-VAELADSAEIKTT-----ISIHQLID- 572
                .|.|:.|::     ||..||   :.:.:.|.:| ..||.|....|..     |.|....| 
Yeast   568 LSTADVKPDEDKTIYPVFLALKTKNGVDSSVVLSERSKTIELEDPTFFKVNSEQSGIYITSYTDE 632

  Fly   573 FLGKLIESKDIVDLNEGKINLLESTYNLKSSKNAEVRFRLNRLIIRARLIKRL---DEILEFANS 634
            ...||.:..|::.: |.::.|:.....|.:|........|| |:.:....|..   |:|:   ||
Yeast   633 RWAKLGQQADLLSV-EDRVGLVADVKTLSASGYTSTTNFLN-LVSKWNNEKSFVVWDQII---NS 692

  Fly   635 NFRMKFCRPIYRDLAGW---PEAKPAAIRNFVNVKDQMMAVCSH 675
            ...||         :.|   |:....|:.||..   |:::..:|
Yeast   693 ISSMK---------STWLFEPKETQDALDNFTK---QLISGMTH 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 170/694 (24%)
APE2NP_012765.3 M1_APN-Q_like 109..543 CDD:341064 124/482 (26%)
ERAP1_C 614..928 CDD:463368 28/128 (22%)
Blue background indicates that the domain is not in the aligned region.

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