DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and APM1

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_195035.2 Gene:APM1 / 829446 AraportID:AT4G33090 Length:879 Species:Arabidopsis thaliana


Alignment Length:644 Identity:155/644 - (24%)
Similarity:242/644 - (37%) Gaps:203/644 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LPIYQVQKRNMGRLGVVDPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKIL 126
            ||.:.|.||...||         .||||              |....|:|.....:: |:...|:
plant    10 LPKFAVPKRYDLRL---------NPDLI--------------ACTFTGTVAIDLDIV-ADTRFIV 50

  Fly   127 LDVRDINVTNATL----------LAGGSELPINFFISDAVDDIGQKLTLE----LPSGTA----- 172
            |:..|::|.:|::          ||...   :..|..|.:      |.||    ||.|..     
plant    51 LNAADLSVNDASVSFTPPSSSKALAAPK---VVLFEEDEI------LVLEFGEILPHGVGVLKLG 106

  Fly   173 -KGSLN------VRIDYETSSSASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKF 230
             .|.||      .|..||.:               |::.....:|.:...||...||.|.||.|.
plant   107 FNGVLNDKMKGFYRSTYEHN---------------GEKKNMAVTQFEPADARRCFPCWDEPACKA 156

  Fly   231 TYDATVEHPSELTALMS-ALIDKKEPG--KTLFKQEVPI-PAYLVAIAIG--KLVSRPLGENSSV 289
            |:..|:|.|::|.||.: .::::|..|  |.:..||.|| ..|||||.:|  ..|.....:...|
plant   157 TFKITLEVPTDLVALSNMPIMEEKVNGNLKIVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKV 221

  Fly   290 WAEEAIVDACAEEF-----SETATMLKTATELCGPYVWKQYDLLVMPPSFPFGGMENPCLTFVTP 349
            .....:..|...:|     ::|..:.|....:  ||...:.|::.: |.|..|.|||..|.....
plant   222 RVYCQVGKADQGKFALHVGAKTLDLFKEYFAV--PYPLPKMDMIAI-PDFAAGAMENYGLVTYRE 283

  Fly   350 TLLAGDKS---------LADVVAHEIAHSWTGNLVTNKNFEHFWLNEGF---------------- 389
            |.|..|:.         :|.|||||:||.|.|||||.:.:.|.||||||                
plant   284 TALLYDEQHSAASNKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEW 348

  Fly   390 ---TVFVESKIVG-RMQGAKELDFKMLSNLTDLQECIRTQLNKTPELTKLVVDLSNCGPDDAFSS 450
               |.|::....| |:.|.:|            ...|..::|...|:            |:.|.:
plant   349 KIWTQFLDESTEGLRLDGLEE------------SHPIEVEVNHAAEI------------DEIFDA 389

  Fly   451 VPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKKDKLSAVD 515
            :.|.||::.:|.|:...|. .||:..|..|:|.:||.:.:|:|..:||     :....:.::.: 
plant   390 ISYRKGASVIRMLQSYLGA-EVFQKSLAAYIKNHAYSNAKTEDLWAAL-----EAGSGEPVNKL- 447

  Fly   516 WDLWLKSEGMPPVIPNFDESLANVTKELASLWSSKSVAELADSAEIKTTISIHQLIDFLGKLIES 580
            ...|.|.:|.|.|                             ||:||                  
plant   448 MSSWTKQKGYPVV-----------------------------SAKIK------------------ 465

  Fly   581 KDIVDLNEGKINLLESTYNLKSSKNAEVRFRLNRLIIRARLIKRLDEILEFANSNFRMK 639
                   :||:.|.:|.: |.|....|.::.:...:......||.:.:||..:..:.:|
plant   466 -------DGKLELEQSRF-LSSGSPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYDLK 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 148/627 (24%)
APM1NP_195035.2 M1_APN-Q_like 18..453 CDD:341064 131/516 (25%)
ERAP1_C 536..855 CDD:463368
Blue background indicates that the domain is not in the aligned region.

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