DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and RNPEPL1

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_060696.4 Gene:RNPEPL1 / 57140 HGNCID:10079 Length:725 Species:Homo sapiens


Alignment Length:545 Identity:178/545 - (32%)
Similarity:268/545 - (49%) Gaps:43/545 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 AGGSE---LPINFFISDAVDDIGQKLTLELPSG-TAKGSLNVRIDYETSSSASGLQWLNPTQTLG 201
            |.|||   .|:.|.: |...|.|..||:.||.. .|.....|.:.| ||:.|..:.||:|..|.|
Human   125 APGSEPACCPLAFRV-DPFTDYGSSLTVTLPPELQAHQPFQVILRY-TSTDAPAIWWLDPELTYG 187

  Fly   202 KEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSALID--KKEPGKTLFKQEV 264
            ...|::|:|..::..||..||.||||||.||.|.|:.||.:..||||...  .:|.|...|..|.
Human   188 CAKPFVFTQGHSVCNRSFFPCFDTPAVKCTYSAVVKAPSGVQVLMSATRSAYMEEEGVFHFHMEH 252

  Fly   265 PIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFSETATM-LKTATELCGPYVWKQYDLL 328
            |:||||||:..|.|....:|..|.||||..::.....:.|..... |..|..|.|||:|.:||::
Human   253 PVPAYLVALVAGDLKPADIGPRSRVWAEPCLLPTATSKLSGAVEQWLSAAERLYGPYMWGRYDIV 317

  Fly   329 VMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNKNFEHFWLNEGFTVFV 393
            .:|||||...||||||||:..::|..|:.|...|.||:||||.||.|||..:|..||:||...:.
Human   318 FLPPSFPIVAMENPCLTFIISSILESDEFLVIDVIHEVAHSWFGNAVTNATWEEMWLSEGLATYA 382

  Fly   394 ESKIVGRMQGAKELDFKMLSNLTDLQECIRTQ--LNKTPELTKLVVDLS-NCGPDDAFSSVPYIK 455
            :.:|.....||.   |..|.....|....|..  |.:...::||.|.|. ...|....:...|.|
Human   383 QRRITTETYGAA---FTCLETAFRLDALHRQMKLLGEDSPVSKLQVKLEPGVNPSHLMNLFTYEK 444

  Fly   456 GSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKK--DKLSAVDWDL 518
            |..|:.||..|.|.|..|:.|||.|::||.:.|:..:|...:...:|.:..::  |..:.::::.
Human   445 GYCFVYYLSQLCGDPQRFDDFLRAYVEKYKFTSVVAQDLLDSFLSFFPELKEQSVDCRAGLEFER 509

  Fly   519 WLKSEGMPPVIPNFDE--SLANVTKELASLWSSKSVAELADSAE---------IKTTISIHQLID 572
            ||.:.|.|...|:..:  ||....:.|..||:::.:.:.|.||.         .:|.:.:.:|:|
Human   510 WLNATGPPLAEPDLSQGSSLTRPVEALFQLWTAEPLDQAAASASAIDISKWRTFQTALFLDRLLD 574

  Fly   573 FLGKLIESKDIVDLNEGKINLLESTYNLKSSKNAEVRFRLNRLIIRARLIKRLDEILEFANSNFR 637
              |..:..:.::.|::...:||:       |.|||:|.|..::::|......|..:..|..|...
Human   575 --GSPLPQEVVMSLSKCYSSLLD-------SMNAEIRIRWLQIVVRNDYYPDLHRVRRFLESQMS 630

  Fly   638 MKFCRPIYRDLAGWPEAKPAAIRNF 662
            ..:..|:|.||.      ..|:::|
Human   631 RMYTIPLYEDLC------TGALKSF 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 178/545 (33%)
RNPEPL1NP_060696.4 M1_LTA4H 29..512 CDD:341062 143/391 (37%)
Leuk-A4-hydro_C 560..673 CDD:462686 23/105 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..699
Blue background indicates that the domain is not in the aligned region.

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