DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and Lvrn

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_038953135.1 Gene:Lvrn / 502160 RGDID:1562779 Length:987 Species:Rattus norvegicus


Alignment Length:684 Identity:151/684 - (22%)
Similarity:247/684 - (36%) Gaps:210/684 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 VDPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKILLDVRDINV-------- 134
            :.|.:.|.|.|..|....:..:...|.:.:   :||.|          .|:.:.:.|        
  Rat   112 LQPDNLSTPSLTFTGRVNITVRCTVATSTL---LLHSF----------FLNYKQVEVWGPLAPDT 163

  Fly   135 TNATLLAGGSELPIN--FFISD---AVDDIGQKLTLELPSGTAKGSLNVRIDYETSSSASG--LQ 192
            .|||:    ..:|:.  :|..|   .|.|:||             ||:....||.:...||  ||
  Rat   164 RNATV----GRVPLENVWFALDMQYVVLDLGQ-------------SLDPGSSYELNFDFSGQVLQ 211

  Fly   193 ------WLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDAT-VEHPSELTALMSALI 250
                  :||......:....:.:|.:...||.|.||.|.||:|.|::.| :.||..:     ||.
  Rat   212 EGSEGLFLNLYTDEDQLRALIATQMEPTFARHVFPCFDEPALKATFNITIIHHPGYV-----ALS 271

  Fly   251 DKKEPGK-------------TLFKQEVPIPAYLVAIAIGKL--VSR-PLGENSSVWAEEAIVDAC 299
            :..:.|:             |.|.....:|.||||:.|...  ||| ..|:...|||.:   |..
  Rat   272 NMPQLGQSHRIDVNGSRWTVTSFHTTPRMPTYLVALVICDFDYVSRTERGKEIRVWARK---DDI 333

  Fly   300 AEEFSETATMLKTATELCGP------------YVWKQYDLLVMPPSFPFGGMEN-PCLTFVTPTL 351
            |:.:      |..|....||            |...:.|::.: |:|..|.||| ..:.|....|
  Rat   334 ADGY------LDFAANHTGPVFSFLEDLFNISYPLPKTDIIAL-PTFVNGAMENWGLMIFDASLL 391

  Fly   352 LAGDKSLAD-------VVAHEIAHSWTGNLVTNKNFEHFWLNEGFTVFVESKIVGRMQGAKELDF 409
            |..|..|.:       :::||:.|.|.|||||...:.:.||||||..:.|..:.....  .::..
  Rat   392 LELDDDLPEKRAMILSILSHEVGHQWFGNLVTMSWWNNIWLNEGFASYFEVGLTNYFY--PKVPR 454

  Fly   410 KMLSNLTDLQECIR--------------TQLNKTPELTKLVVDLSNCGPDDAFSSVPYIKGSTFL 460
            .|:..||.|.:.:.              ....:|.|:.:|            |....|.||:...
  Rat   455 NMIFFLTVLHDILEDDHSLESRAVSTPVENFTETREINRL------------FDIYTYKKGACMA 507

  Fly   461 RYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKD----FQSALYDYFIDTDKKDKLSAVD------ 515
            ..|.. |....:|...|:.||:.::|.:.|..|    .|.|:          |:.|.:.      
  Rat   508 WMLAG-FLSQHLFINALKSYLETFSYSNAEQDDLWRHIQMAI----------DEQSIIHLPATVK 561

  Fly   516 --WDLWLKSEGMPPVI-----------PNFDESLAN-------------------VTKELASLWS 548
              .|.|....|.|.:.           |.:.|.:.|                   :|:.|  :|.
  Rat   562 RIMDSWTHQSGFPVITLNASTGVVKQEPFYLERVENQTLLSHNTWIVPIFWMKNGITQPL--VWL 624

  Fly   549 SKSV-----AELADSAE----IKTTISIHQLIDF-------LGKLIES--KDIVDLNEGKINLLE 595
            .||.     .:|:||..    :...::.:..:::       |.:.:|.  |.|..:|  ::.|:.
  Rat   625 DKSSMIFPGMKLSDSDSDWVILNFNVTGYYRVNYDKLGWKKLNQQLEKDPKAIPVIN--RLQLVS 687

  Fly   596 STYNLKSSKNAEVRFRLNRLIIRARLIKRLDEIL 629
            ..:.|..:...|:...|:    ..:.|.:.||||
  Rat   688 DAFALSKNNYIEIETALD----LTKYIAKEDEIL 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 151/683 (22%)
LvrnXP_038953135.1 M1_APN-Q_like 102..569 CDD:341064 124/526 (24%)
ERAP1_C 643..948 CDD:463368 14/81 (17%)
Blue background indicates that the domain is not in the aligned region.

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