DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and rnpep

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001002741.2 Gene:rnpep / 437014 ZFINID:ZDB-GENE-040718-241 Length:624 Species:Danio rerio


Alignment Length:637 Identity:223/637 - (35%)
Similarity:338/637 - (53%) Gaps:41/637 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 KLLPIYQVQKRNMGRLGVVDPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDK 124
            |.|.:|..:..:     |...||:.|   ...||..|:.|:||....|.|:.....:.:..:..:
Zfish     3 KTLTLYSDKAED-----VATSSSFRQ---FKIEHFHLDLKVDFLQKSISGTETIELQCIQDSQSE 59

  Fly   125 ILLDVR-DINVTNATLLAGGSELPINFFISDAVDDIGQKLTLELPSG-TAKGSLNVRIDYETSSS 187
            :.||:. .::|...||.....:.....|::......|..|.::.|:. ::...|.:.|.| |::.
Zfish    60 LQLDIHPSLSVHEITLSQNARDWTRTEFLTQDFTSYGTTLLVKFPTAFSSDDKLQLAIRY-TATD 123

  Fly   188 ASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSA--LI 250
            ..|:.||.|.||.||..||:|:|.||:..||..||.||||||.||.|.|:.|...||:|||  ..
Zfish   124 GPGVCWLEPEQTAGKLKPYVFTQGQAVLNRSCFPCFDTPAVKSTYSAAVQVPEGFTAVMSANKWE 188

  Fly   251 DKKEPGKTLFKQEVPIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFSET-ATMLKTAT 314
            .:|..|..||..|.||||||||:|:|.|.|..:|..:.||.|..::.|..:|:... ...|....
Zfish   189 QRKADGAFLFTMEHPIPAYLVALAVGDLQSAEVGPRTRVWTEPCLLQAAKQEYDNVIEDFLSVGE 253

  Fly   315 ELCGPYVWKQYDLLVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNKN 379
            :|.|||||.:||:|.||||||||||||||||||||.|||||:|||||:.|||.|||.||||||..
Zfish   254 KLFGPYVWGRYDVLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIVHEICHSWFGNLVTNAT 318

  Fly   380 FEHFWLNEGFTVFVESKIVGRMQGAKELDFKMLSNLTDLQECIRTQLNKTPE---LTKLVVDLS- 440
            :..||||||||::.:.::...:.|..   :..|...|. :..:|..::.|.|   |.||.|.:. 
Zfish   319 WGDFWLNEGFTMYAQRRVCRELYGEA---YTCLEAATG-KALLRQHMDNTGEDHPLNKLRVKIEP 379

  Fly   441 NCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDT 505
            ...|||.::..||.||..|:.||..|.|..:.|:.||:.|::|:.::|:..:|......:||.:.
Zfish   380 GVDPDDTYNETPYEKGFCFVSYLAHLTGDQSRFDTFLKAYVEKFKFRSVLAEDALEFYLEYFPEL 444

  Fly   506 DKKD--KLSAVDWDLWLKSEGMPPVIPNFD--ESLANVTKELASLWSSKSV-AELADSAEIKTTI 565
            .:::  |:..:|:|.||...|.||.:|:..  ::|....:.||..|.|.:: .|.....::|:. 
Zfish   445 KERNVHKIEGLDFDSWLNVPGWPPYVPDLSAGQTLMKPAELLAEKWLSHNLDLESICKTDLKSW- 508

  Fly   566 SIHQLIDFLGKLIESKDIVDLNEGKINLLESTYN-LKSSKNAEVRFRLNRLIIRARLIKRLDEIL 629
            ..:|.:.||.:::|...:.|   |.:..||..|: :..|.|||::.|..:::.:.:.......|.
Zfish   509 KTYQTVYFLDRILEKSPLPD---GNLKKLEECYSQIIKSNNAELKVRWAQIVAKNQYSPGFQHIR 570

  Fly   630 EFANSNFRMKFCRPIYRDL-AGWPEAKPAAIRNF--------VNVKDQMMAV 672
            :|.:|..:.|:..|:||.| .|..|.|..||..|        |||::.:..:
Zfish   571 DFLSSQGKQKYTLPVYRALWNGSEETKALAIEMFSATSGQLHVNVRNYVKKI 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 219/618 (35%)
rnpepNP_001002741.2 None
Blue background indicates that the domain is not in the aligned region.

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