DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and CG11951

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001350853.2 Gene:CG11951 / 43463 FlyBaseID:FBgn0039656 Length:842 Species:Drosophila melanogaster


Alignment Length:600 Identity:150/600 - (25%)
Similarity:230/600 - (38%) Gaps:168/600 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PSSYSQPDLITTEHSALNWKIDF---AATKIQGSVLHRFKVLTANLDKILLDVRDINV--TNATL 139
            |.||....|...|:..     ||   ...|||..||.       |...|.|..:|:.:  |..||
  Fly    33 PQSYDVRILTQLENPD-----DFHFNGTVKIQIEVLQ-------NTHNITLHSKDLTIDDTEITL 85

  Fly   140 -LAGGSELPINFFISDAVDD--------------IGQKLTLELPSGTAKGSLNVRIDYETS---S 186
             ..||.|...|...|.||:.              .||...|.||. :||....:...|.:|   :
  Fly    86 SQIGGEETTENCITSTAVNPTHDFYILNTCKELLAGQFYELSLPF-SAKLQDQLAGYYRSSYVNT 149

  Fly   187 SASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSALID 251
            .|:..:|::.|            |.:...||...||.|.|..|.::..|:.:..:.|.|.:..::
  Fly   150 VANETRWISVT------------QFEPAAARLAFPCFDEPGYKASFAITLGYHKKYTGLSNMPVN 202

  Fly   252 KKEPGK-------TLFKQEVPIPAYLVAIAIG----KLVSRPLGENSSVWAEEAIVDACAEEFSE 305
            :..|.:       |.|::.:|:..||||.::.    |..:.|.|.....||....:|.|      
  Fly   203 ETRPHESIPDYVWTSFEESLPMSTYLVAYSLNDFSHKPSTLPNGTLFRTWARPNAIDQC------ 261

  Fly   306 TATMLKTATELCGPYVWKQYDLL------------VMPPSFPFGGMEN-PCLTFVTPTLL----- 352
                 ..|.|| ||.|.|.|:.|            :..|.|..|.||| ..:||...|||     
  Fly   262 -----DYAAEL-GPKVLKYYEELFGIKFPLPKVDQIAVPDFSAGAMENWGLVTFAESTLLYSPEY 320

  Fly   353 ---AGDKSLADVVAHEIAHSWTGNLVTNKNFEHFWLNEGFTVFVESKIVGRMQGA-KELDFKMLS 413
               ...:..|::||||:||.|.|||||.|.:...||||||..:|.|..|..:... :.|..:.:|
  Fly   321 SSQEAKQETANIVAHELAHQWFGNLVTMKWWTDLWLNEGFATYVASLCVEDIHPQWRTLQLESMS 385

  Fly   414 NLTDL--QECIRTQ--LNKTPELTKLVVDLSNCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFE 474
            ||..:  ::.:.:.  :::..|:|..:        .::|..:.|.|||:.:|.:. ||.|...|.
  Fly   386 NLLTIFRKDSLESSHPISRPIEMTSQI--------SESFDEISYQKGSSVIRMMH-LFLGEEAFR 441

  Fly   475 PFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKKDKLSAVDWDLWLKSEGMPPVIPNFDESLANV 539
            ..|:.||:||.||:.|..                        :||              |||...
  Fly   442 TGLKSYLEKYTYKNAEQD------------------------NLW--------------ESLTQA 468

  Fly   540 TKELASLWSSKSVAELADSAEIKTTISIHQLIDFLGKLIESKDIVDLNEGKINLLESTYNLKSSK 604
            ..:..||....::..:.||..::|...:                       ||:... |..:::|
  Fly   469 AHKTGSLPKDYNIKTIMDSWTLQTGYPV-----------------------INVTRD-YTSRTAK 509

  Fly   605 NAEVRFRLNRLIIRA 619
            .::.|:.||..:.||
  Fly   510 LSQERYLLNTDVSRA 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 149/599 (25%)
CG11951NP_001350853.2 M1_APN-Q_like 35..490 CDD:341064 139/538 (26%)
ERAP1_C 574..902 CDD:463368
Blue background indicates that the domain is not in the aligned region.

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