DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and CG42335

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_732655.3 Gene:CG42335 / 42558 FlyBaseID:FBgn0259237 Length:924 Species:Drosophila melanogaster


Alignment Length:135 Identity:34/135 - (25%)
Similarity:46/135 - (34%) Gaps:52/135 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SGFTVTALSTVERSPAFNFPQDGGTPGNDLTRQAAINVSN----------GITSGVLTGVVPLQT 69
            :|..||.|:|.:       |:   ....||.|:..|:..|          ||..|.|. ::.|.|
  Fly   171 AGEIVTILATTQ-------PR---MEEKDLVRRIMIDAKNFDTRVWIAAVGIVMGTLV-ILSLGT 224

  Fly    70 GI-----------------------LPNIV-NTG----TPTGQTCVCVPTGRC---NTTSTGGTT 103
            .|                       :|||: |.|    ...||..:..|..|.   |...|||..
  Fly   225 CIVLYKECREPAANDKDEELDSLELVPNIILNPGFCDSDDQGQNPLAPPIPRTLPYNRYRTGGPH 289

  Fly   104 DGAGQ 108
            ||.|:
  Fly   290 DGRGR 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856 9/34 (26%)
leuko_A4_hydro 79..681 CDD:274120 12/37 (32%)
CG42335NP_732655.3 M1_APN-Q_like 34..487 CDD:341064 34/135 (25%)
ERAP1_C 566..878 CDD:463368
Blue background indicates that the domain is not in the aligned region.

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