DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and rnpep

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_998856.2 Gene:rnpep / 407876 XenbaseID:XB-GENE-971412 Length:618 Species:Xenopus tropicalis


Alignment Length:621 Identity:228/621 - (36%)
Similarity:337/621 - (54%) Gaps:29/621 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VVDPSSYS--QPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKILLDV-RDINVTNAT 138
            |...|||.  ||     ||..|...:|..|..::||.....:|| ...:::.||. |.:.|..|.
 Frog    11 VATASSYREFQP-----EHMHLELTVDTEARILRGSQRLDVQVL-RETEELRLDTHRCLRVLGAR 69

  Fly   139 LLAGGSELPINFFISDAVDDIGQKLTLELPSGTAKGS-LNVRIDYETSSSASGLQWLNPTQTLGK 202
            |..|..|.....:........|..:.|.|||....|: :.|.:|||.:.| .|:.||:|.||.||
 Frog    70 LEKGQGEHEELSWEEKPFTRYGTMVVLRLPSLLPPGARVRVILDYEAADS-PGVCWLDPQQTAGK 133

  Fly   203 EHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSALIDKKEPGKTLFKQEVPIP 267
            :.|||::|.||:..||..||.||||||.||.|.|:.|...||:|||....::.....|:...|||
 Frog   134 KKPYMYTQGQAVLNRSFFPCFDTPAVKCTYSANVKVPEGFTAVMSANNSDRQGDTFKFEMAQPIP 198

  Fly   268 AYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFSET-ATMLKTATELCGPYVWKQYDLLVMP 331
            |||||:.:|.:||..:|..|.||||..:::|..:|:... ...||...:|.|||||.:||:|.||
 Frog   199 AYLVALVVGDIVSAEVGPRSRVWAEPCLIEAAKKEYDGVIEEFLKVGEKLFGPYVWGRYDVLFMP 263

  Fly   332 PSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNKNFEHFWLNEGFTVFVESK 396
            ||||||||||||:|||||.|||||:|||||:.|||:|||.|||||:.|:..||||||||::.:.:
 Frog   264 PSFPFGGMENPCITFVTPCLLAGDRSLADVIIHEISHSWFGNLVTSANWGEFWLNEGFTMYAQRR 328

  Fly   397 IVGRMQGAKELDFKMLSNLTDLQECIRTQLNKTPE---LTKLVVDLS-NCGPDDAFSSVPYIKGS 457
            |...:.|......:..:.    :..:|..::.:.|   |.||.|.:. ...|||.::..||.||.
 Frog   329 ITTELYGPAYTCLEAAAG----RALLRQHMDSSGEDHPLNKLRVKIEPGVDPDDTYNETPYEKGF 389

  Fly   458 TFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKK--DKLSAVDWDLWL 520
            .|:.||..|.|..|.|:.||:.|:.|:.::||...:......:||.:...|  |.:|.:::|.||
 Frog   390 CFVSYLAHLTGDQTKFDAFLKAYVNKFKFQSILADEALEFYLEYFPELKAKGVDTISGLEFDHWL 454

  Fly   521 KSEGMPPVIPNFD--ESLANVTKELASLWSSKSVAELADSAEIKTTISIHQLIDFLGKLIESKDI 583
            .:.|.||.:|:..  |:|.....|||:||||..:.....|....|....:||:.||.:::|   :
 Frog   455 NTPGWPPFLPDLSPGEALMKPATELANLWSSTPLDTETISKVDPTIWRTYQLVYFLDRVLE---L 516

  Fly   584 VDLNEGKINLLESTY-NLKSSKNAEVRFRLNRLIIRARLIKRLDEILEFANSNFRMKFCRPIYRD 647
            ..|.:|.:..||..| .:.::.|||:|.|..:::::........::.:|.:...:.|:..|:||.
 Frog   517 SPLPDGNVEQLEKYYPKISNATNAELRLRWAQIVLKNDYQLHFHKVRDFLHCQGKQKYTLPLYRA 581

  Fly   648 L-AGWPEAKPAAIRNFVNVKDQMMAVCSHTIEKDLG 682
            : ||...|:..|...|.....|:.|...:.:::.||
 Frog   582 MQAGSKAAQDLARETFTQTCPQLHANVQNYVKRILG 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 225/616 (37%)
rnpepNP_998856.2 M1_LTA4H 10..455 CDD:341062 183/454 (40%)
Leuk-A4-hydro_C 501..616 CDD:462686 27/117 (23%)
Blue background indicates that the domain is not in the aligned region.

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