DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and lta4h

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_998451.1 Gene:lta4h / 406575 ZFINID:ZDB-GENE-040426-2477 Length:611 Species:Danio rerio


Alignment Length:622 Identity:268/622 - (43%)
Similarity:384/622 - (61%) Gaps:35/622 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VVDPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKILLDVRDINVTNATLLA 141
            |.||||:|.....:|:|..|.:.:||....::|.|....:||......:.||.:|:.::..:  |
Zfish     4 VSDPSSFSSLSKCSTKHLNLIYHVDFDRHVLKGKVALTVEVLEDKFSSLTLDSKDLKISKVS--A 66

  Fly   142 GGSELPINFFISDAVDDIGQK-------LTLELPSGTAKGS-LNVRIDYETSSSASGLQWLNPTQ 198
            .|..         |..::|.|       |.:.||...::|. :.|.|:||||.:|:.||||.|.|
Zfish    67 NGQA---------AKFELGAKHKFKGSPLEITLPFELSRGQHVIVEIEYETSPTATALQWLTPKQ 122

  Fly   199 TLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSALIDKKEPGKT----- 258
            |.||:|||:||||||.|.|:::||||||:||.||.|.|..|.||.||||||.|.:||..:     
Zfish   123 TAGKKHPYLFSQCQATHCRTMVPCQDTPSVKHTYYAQVSVPRELVALMSALRDGQEPDPSDSSRV 187

  Fly   259 --LFKQEVPIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFSETATMLKTATELCGPYV 321
              .|:|.||:|:||:||.:|.|.||.:|..|.||:|:..||..|.||:||.||||||..|.||||
Zfish   188 IYRFRQPVPMPSYLIAIVVGALESREIGPRSRVWSEKEYVDEAAYEFAETETMLKTAESLAGPYV 252

  Fly   322 WKQYDLLVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNKNFEHFWLN 386
            |.|||:||:|||||:||||||||||||||:||||:|||.|:||||:||||||||||:.:||||||
Zfish   253 WGQYDVLVLPPSFPYGGMENPCLTFVTPTVLAGDRSLAGVIAHEISHSWTGNLVTNRTWEHFWLN 317

  Fly   387 EGFTVFVESKIVGRMQGAKELDFKMLSNLTDLQECIRTQLNKTPELTKLVVDLSNCGPDDAFSSV 451
            ||.||::|..|...|:|.:...||.:....:|.|.:: |......||.||.:|.....|:|||||
Zfish   318 EGHTVYIERMIARCMEGEQLRQFKGIGGWKELHESVK-QFGANNVLTNLVPNLHEVDTDEAFSSV 381

  Fly   452 PYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKKDKLSAVDW 516
            ||.||...|.:||:|.|||.||..|::.|::.:||.|:.|:::::.|:.||  .||.|.|:.|||
Zfish   382 PYEKGFALLYHLEELMGGPEVFMGFVKSYIQLFAYGSVTTEEWKNYLFTYF--KDKVDILNKVDW 444

  Fly   517 DLWLKSEGMPPVIPNFDESLANVTKELASLWSSKSVAELAD--SAEIKTTISIHQLIDFLGKLIE 579
            :.|:.:.||.||.|.:|.::|:....|...|.....|:||.  .|::| .::..|||:|:..|::
Zfish   445 NAWMHTPGMAPVRPQYDTTMADACTSLCQKWVKAKEADLASFTEADVK-QLNSPQLIEFMALLLQ 508

  Fly   580 SKDIVDLNEGKINLLESTYNLKSSKNAEVRFRLNRLIIRARLIKRLDEILEFANSNFRMKFCRPI 644
             :|.:.|:.  :..:...|.|.:.||||||||..|:.::|:..:.:...|:.|....||||.||:
Zfish   509 -EDPLPLSH--VKKMGEVYKLNNIKNAEVRFRWLRICVKAQWEEAVPLALKMATEQGRMKFTRPL 570

  Fly   645 YRDLAGWPEAKPAAIRNFVNVKDQMMAVCSHTIEKDL 681
            :.::..:.:....|::.|..::..:..|.:..:.|||
Zfish   571 FTEVYNFSKYSDEAVKTFKEIRGSLHPVTAMLVAKDL 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 265/618 (43%)
lta4hNP_998451.1 leuko_A4_hydro 18..607 CDD:274120 260/606 (43%)
Blue background indicates that the domain is not in the aligned region.

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