DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10602 and LTA4H

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_000886.1 Gene:LTA4H / 4048 HGNCID:6710 Length:611 Species:Homo sapiens


Alignment Length:616 Identity:274/616 - (44%)
Similarity:385/616 - (62%) Gaps:22/616 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VVDPSSYSQP-DLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKILLDVRDINVTNATLL 140
            :||..|.:.| .:..|:|..|...:||....:.|:.....:....||..::||.:|:.:....: 
Human     4 IVDTCSLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVI- 67

  Fly   141 AGGSELPINFFISDAVDDIGQKLTLELPSGTAKG-SLNVRIDYETSSSASGLQWLNPTQTLGKEH 204
             .|.|  :.:.:.:.....|..:.:.||...:|. .:.:.|.:|||..:|.||||.|.||.||||
Human    68 -NGQE--VKYALGERQSYKGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEH 129

  Fly   205 PYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSAL-----IDKKEPGKTLFK--Q 262
            ||:||||||||.|:::||||||:||.||.|.|..|.||.|||||:     .|.::|.:.::|  |
Human   130 PYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQ 194

  Fly   263 EVPIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFSETATMLKTATELCGPYVWKQYDL 327
            :||||.||:|:.:|.|.||.:|..:.||:|:..|:..|.|||||.:|||.|.:|.|||||.||||
Human   195 KVPIPCYLIALVVGALESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGGPYVWGQYDL 259

  Fly   328 LVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNKNFEHFWLNEGFTVF 392
            ||:|||||:||||||||||||||||||||||::|:||||:|||||||||||.::|||||||.||:
Human   260 LVLPPSFPYGGMENPCLTFVTPTLLAGDKSLSNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVY 324

  Fly   393 VESKIVGRMQGAKELDFKMLSNLTDLQECIRTQLNKTPELTKLVVDLSNCGPDDAFSSVPYIKGS 457
            :|..|.||:.|.|...|..|....:||..::| ..:|...|||||||::..||.|:|||||.||.
Human   325 LERHICGRLFGEKFRHFNALGGWGELQNSVKT-FGETHPFTKLVVDLTDIDPDVAYSSVPYEKGF 388

  Fly   458 TFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKKDKLSAVDWDLWLKS 522
            ..|.|||.|.|||.:|..||:.|::|::||||.|.|::..||.||  .||.|.|:.|||:.||.|
Human   389 ALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYF--KDKVDVLNQVDWNAWLYS 451

  Fly   523 EGMPPVIPNFDESLANVTKELASLWSSKSVAEL--ADSAEIKTTISIHQLIDFLGKLIESKDIVD 585
            .|:||:.||:|.:|.|....|:..|.:....:|  .::.::| .:|.|||.:||.:.::.   ..
Human   452 PGLPPIKPNYDMTLTNACIALSQRWITAKEDDLNSFNATDLK-DLSSHQLNEFLAQTLQR---AP 512

  Fly   586 LNEGKINLLESTYNLKSSKNAEVRFRLNRLIIRARLIKRLDEILEFANSNFRMKFCRPIYRDLAG 650
            |..|.|..::..||..:..|:|:|||..||.|:::....:...|:.|....||||.||:::|||.
Human   513 LPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKWEDAIPLALKMATEQGRMKFTRPLFKDLAA 577

  Fly   651 WPEAKPAAIRNFVNVKDQMMAVCSHTIEKDL 681
            :.::...|:|.:...|..|..|.:..:.|||
Human   578 FDKSHDQAVRTYQEHKASMHPVTAMLVGKDL 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 271/612 (44%)
LTA4HNP_000886.1 leuko_A4_hydro 6..608 CDD:274120 271/612 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.