DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and Aopep

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_008769651.1 Gene:Aopep / 290963 RGDID:1309592 Length:886 Species:Rattus norvegicus


Alignment Length:587 Identity:142/587 - (24%)
Similarity:243/587 - (41%) Gaps:116/587 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 VRIDYETSSSASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSEL 242
            :||.|:|......:.|.:...  |:  |.:::....|:.|::.|||:.|....|:.|||...:..
  Rat   308 IRIWYKTKPEGQSVTWTSDQD--GR--PCVYTMGSPINNRALFPCQEPPVAMSTWQATVRAAASF 368

  Fly   243 TALMSALIDKKEPGKTLFKQ---------EVPIPAYLVAIAIG-----KLVSRPL---------- 283
            ..|||.   :|....|..::         .:|:||....||:|     |..:.||          
  Rat   369 VVLMSG---EKSAKPTPLREGYMSWHYYVTMPMPASTFTIAVGCWTEMKPKTSPLDDLTEHTLPL 430

  Fly   284 ---------GENSS----------------------VWAEEAIVDACAEEFS-ETATMLKTATEL 316
                     |...|                      |:|...:..||.|... ...:.|..|..:
  Rat   431 RPSDADFRYGNTCSHMEYPCRFQSASAATQNIIPYRVFAPVCLEGACREALLWLIPSCLSAAHSV 495

  Fly   317 CGPYVWKQYDLLVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADV-VAHEIAHSWTGNLVTNKNF 380
            .|.:.:.:.|:|::|.:||..||.:|.:.|::.:.|.|...|... :.|||||:|.|..:..:::
  Rat   496 LGTHPFSRLDILIVPTNFPSLGMASPHIIFLSQSTLTGTSHLCGTRLCHEIAHAWFGLAIGARDW 560

  Fly   381 EHFWLNEGFTVFVESKIVGRMQGAKELDFKMLSNLTDLQECIR-----TQLNKTPELTKLV---- 436
            ...||:|||...:|......   |::|.........:|:.|:|     .:|..:||..:::    
  Rat   561 TEEWLSEGFATHLEDIFWAE---AQQLPPHEALEQQELRACLRWHRLQDELQNSPEGMQVLRPNK 622

  Fly   437 ------------VDLSNCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSI 489
                        |..:...|:..|..|.|:||...||:|....|..|.| ||||.::..:..:.|
  Rat   623 EKTGHVSASGASVVKNGLNPEKGFMQVHYLKGYFLLRFLARTLGEETYF-PFLRKFVHLFHGQLI 686

  Fly   490 ETKDFQSALYDYFIDTDKKDKLSA--VDWDLWLKSEGMPPVIPN----FDESLANVTKELAS--- 545
            .::||...|.: .|..:|:..||.  :..| ||:..|:|..:..    .|.|.:.:.:::.|   
  Rat   687 LSQDFLQMLLE-SIPENKRFGLSVENIVGD-WLECPGIPKALQEERKAKDCSPSRLVRQVGSEVA 749

  Fly   546 LW------SSKSVAELADSAEIKTTISIHQLIDFLGKLIESKDIVDLNEGKINLLESTYNLKSSK 604
            .|      ..|......::|..|  :|..|::..|..|:|.|   .|:...::.|:.||:|: .:
  Rat   750 KWIRVNRRPGKRQRRKREAAFEK--LSPDQIVLLLEWLLEQK---TLSPQTLHRLQQTYHLQ-EQ 808

  Fly   605 NAEVRFRLNRLIIRARLIKRLDEILEFANSNFRMKFCRPIYRDLAGWPEAK--PAAIRNFVNVKD 667
            :||||.|...|:|:.:..|..|::..|...:..|...  :|.:|....:|:  ..|.|.|..||.
  Rat   809 DAEVRHRWCELVIKHKYTKAYDQVKRFLQEDQAMGIY--LYGELMVSEDARLQQLAHRCFELVKG 871

  Fly   668 QM 669
            .|
  Rat   872 HM 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 142/587 (24%)
AopepXP_008769651.1 GluZincin <308..704 CDD:472708 96/407 (24%)
Leuk-A4-hydro_C 773..885 CDD:462686 31/107 (29%)
Blue background indicates that the domain is not in the aligned region.

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