DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and Rnpep

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_663392.2 Gene:Rnpep / 215615 MGIID:2384902 Length:650 Species:Mus musculus


Alignment Length:649 Identity:229/649 - (35%)
Similarity:340/649 - (52%) Gaps:58/649 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 PIYQVQKRNMGRLGVVDPSSYSQPDLITTEHSALNWKIDF-------AATKIQGSVLHRFK-VLT 119
            |::..|     .:.|...||:...:::   |..|:.:.:|       .:..:.|:.....: :|.
Mouse    16 PLHSAQ-----AVDVASASSFRAFEIL---HLHLDLRAEFGPPGPGPGSRGLSGTATLELRCLLP 72

  Fly   120 ANLDKILLDVRD-INVTNATLLAG--GSEL----PINFFISDAVDDIGQKLTLEL--PSGTAKGS 175
            ....::.||... :.||.|||..|  |.:.    |:.|. :......||.|.:..  |.|.| ..
Mouse    73 EGASELRLDSHSCLEVTAATLRRGQPGDQQAPAEPVPFH-TQPFSHYGQALCVAFRQPCGAA-DR 135

  Fly   176 LNVRIDYETSSSASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPS 240
            ..:.:.|.. ....|:.||.|.||.||:.|::::|.||:..|:..||.||||||.||.|.:|.|.
Mouse   136 FELELTYRV-GEGPGVCWLAPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCTYSALIEVPD 199

  Fly   241 ELTALMSA-LIDKKEPGKTLFKQEVPIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFS 304
            ..||:||| ..:|:.|.|..|:...|||:||:|:|||.|.|..:|..|.||||..:::|..||:|
Mouse   200 GFTAVMSADTWEKRGPNKFFFQMSHPIPSYLIALAIGDLASAEVGPRSRVWAEPCLIEAAKEEYS 264

  Fly   305 ET-ATMLKTATELCGPYVWKQYDLLVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAH 368
            .. ...|.|..:|.|||||.:||||.||||||||||||||||||||.|||||:|||||:.|||:|
Mouse   265 GVIEEFLATGEKLFGPYVWGRYDLLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISH 329

  Fly   369 SWTGNLVTNKNFEHFWLNEGFTVFVESKIVGRMQGAKELDFKMLSNLTDLQECIRTQLNKTPE-- 431
            ||.||||||.|:..||||||||::.:.:|...:.||.   :..|...|. :..:|..:|.:.|  
Mouse   330 SWFGNLVTNANWGEFWLNEGFTMYAQRRISTILFGAA---YTCLEAATG-RALLRQHMNVSGEEN 390

  Fly   432 -LTKLVVDLS-NCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDF 494
             |.||.|.:. ...|||.::..||.||..|:.||..|.|....|:.||:.|:.::.::||..:||
Mouse   391 PLNKLRVKIEPGVDPDDTYNETPYEKGYCFVSYLAHLVGDQDQFDKFLKAYVDEFKFQSILAEDF 455

  Fly   495 QSALYDYFIDTDKK--DKLSAVDWDLWLKSEGMPPVIPNFD--ESLANVTKELASLWSSKSVAEL 555
            .....:||.:..||  |.:...::|.||.:.|.||.:|:..  :||....:|||.||.:......
Mouse   456 LEFYLEYFPELKKKGVDSIPGFEFDRWLNTPGWPPYLPDLSPGDSLMKPAEELAELWVTSEPDMQ 520

  Fly   556 ADSAEIKTTISIHQLIDFLGKLIESKDIVDLNEGKINLLESTY-NLKSSKNAEVRFRLNRLIIRA 619
            |..|...:|...:||:.||.|:::..   .|..|.:..|..|| .:.:::|||:|.|..::|::.
Mouse   521 AIEAVAISTWKTYQLVYFLDKILQKS---PLPPGNVKKLGETYPKISNAQNAELRLRWGQIILKN 582

  Fly   620 RLIKRLDEILEFANSNFRMKFCRPIYRDLAGWPEAKPAAIR------------NFVNVKDQMMA 671
            ...:...::.:|..|..:.|:..|:|..:.|..|......:            |.||...|::|
Mouse   583 DYQEEFQKVKDFLQSQGKQKYTLPLYHAMMGGSEMARTLAKDTFAATASQLHSNVVNYVQQILA 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 226/633 (36%)
RnpepNP_663392.2 M1_LTA4H 24..484 CDD:341062 184/469 (39%)
Leuk-A4-hydro_C 530..645 CDD:462686 27/117 (23%)
Blue background indicates that the domain is not in the aligned region.

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