DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10602 and ltah-1.1

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001023056.1 Gene:ltah-1.1 / 178176 WormBaseID:WBGene00016589 Length:609 Species:Caenorhabditis elegans


Alignment Length:595 Identity:262/595 - (44%)
Similarity:362/595 - (60%) Gaps:24/595 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKILLDVRDINVTNATLLAGG 143
            |||:.:..:.:|..|.||.||:||....|.|.|.....| ..:.::|:||.||::|.:..|...|
 Worm     8 DPSTAANYEQVTVSHYALKWKVDFEKKHIAGDVSITLDV-KQDTERIVLDTRDLSVQSVALNLNG 71

  Fly   144 SELPINFFISDAVDDIGQKLTLELPSGTAKGSLNVRIDYETSSSASGLQWLNPTQTLGKEHPYMF 208
            ......|.:.|. ..:||||.:...|..:.....:.|.||:|::|:.||:|...||..:..||:|
 Worm    72 EPKKAGFTLEDN-QALGQKLVITTESLKSGDRPVLEIKYESSNNAAALQFLTAEQTTDRVAPYLF 135

  Fly   209 SQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALMSALIDKKEPG----KTL--FKQEVPIP 267
            ||||||:|||::||.|||:||.||:|.|..|..||.||||:.....|.    :|:  |||.|.||
 Worm   136 SQCQAINARSIVPCMDTPSVKSTYEAEVCVPIGLTCLMSAIGQGSTPSECGKRTIFSFKQPVSIP 200

  Fly   268 AYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFSETATMLKTATELCGPYVWKQYDLLVMPP 332
            :||:||.:|.|..:.:.|..:||||.:..:|...||:||..:||.|.::.|||||.:|||:|:|.
 Worm   201 SYLLAIVVGHLERKEISERCAVWAEPSQAEASFYEFAETEKILKVAEDVAGPYVWGRYDLVVLPA 265

  Fly   333 SFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNKNFEHFWLNEGFTVFVESKI 397
            :|||||||||||||:||||||||:||.:|:||||:||||||||||.::||||||||||||:|.||
 Worm   266 TFPFGGMENPCLTFITPTLLAGDRSLVNVIAHEISHSWTGNLVTNFSWEHFWLNEGFTVFLERKI 330

  Fly   398 VGRMQGAKELDFKMLSNLTD-LQECIRTQLNKTPELTKLVVDLSNCGPDDAFSSVPYIKGSTFLR 461
            .|:|.|..|..|:..|...: |...:........|.||||.:|.|..||||||||||.|||..|.
 Worm   331 HGKMYGELERQFESESGYEEALVRTVNDVFGPDHEYTKLVQNLGNADPDDAFSSVPYEKGSALLF 395

  Fly   462 YLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKKDKLSAVDWDLWLKSEGMP 526
            .:|...|..:.||.|||||::|||||::.|::::..|||.|  ||||..|..:||:|||...|:|
 Worm   396 TIEQALGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDSF--TDKKVILDNIDWNLWLHKAGLP 458

  Fly   527 PVIPNFDESLANVTKELASLWSSKSVAELADSAEIKTTISIHQLIDFLGKLIESKDIVDLNE--- 588
            |. |.:|.:.....|:||:.|:::. :|.....|:...:|..|.:..|       |.|.:|:   
 Worm   459 PK-PKYDSTPMQACKDLAAKWTTEG-SEAPTDGEVFAKMSNSQKLAVL-------DAVRVNKTMF 514

  Fly   589 -GKINLLESTYNLKSSKNAEVRFRLNRLIIRARLIKRLDEILEFANSNFRMKFCRPIYRDLAGWP 652
             .::..|.:||.|..:||||::|....|.:..:....:|..|.||.:..|||:|:||||.|.||.
 Worm   515 GDRMPALTATYKLDQAKNAELKFSWLMLGLETKWSPIVDASLAFALAVGRMKYCKPIYRSLFGWS 579

  Fly   653 EAKPAAIRNF 662
            ..:..||..|
 Worm   580 ATRDRAISQF 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 262/595 (44%)
ltah-1.1NP_001023056.1 M1_LTA4H 8..453 CDD:341062 216/448 (48%)
Leuk-A4-hydro_C 495..608 CDD:462686 34/102 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.