DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and ltah-1.2

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_500385.1 Gene:ltah-1.2 / 177123 WormBaseID:WBGene00022610 Length:625 Species:Caenorhabditis elegans


Alignment Length:639 Identity:263/639 - (41%)
Similarity:381/639 - (59%) Gaps:31/639 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LCTSHKLLPIYQVQKRNMGRLGVVDPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLT 119
            :|..|...|     ||        ||.|.:..:.||.||:|:.|.:.|....|.|....|.:.||
 Worm     1 MCQLHNFRP-----KR--------DPCSAANINEITVEHTAIKWTVSFQLKMIIGQATLRCRCLT 52

  Fly   120 ANLDKILLDVRDINVTNATLLAGGSELPINFFISDAV-DDIGQKLTLELPSGTAKGS--LNVRID 181
             :..|::|||||:::.:.::    :.:..:|.|:..| ...|.|:::.||....|..  |.|.:.
 Worm    53 -DATKLVLDVRDLSIRSVSI----NGVDCDFRIAPNVYTFFGSKMSVYLPPQFQKAGTILQVTVA 112

  Fly   182 YETSSSASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVEHPSELTALM 246
            |.||..|:.|||:...||..|..||:|||||||||||::||.|||:||.||:|.|..|:.:|.||
 Worm   113 YGTSPDATALQWMKKEQTADKRMPYLFSQCQAIHARSIVPCMDTPSVKSTYEAEVTVPTGMTCLM 177

  Fly   247 SAL--IDKKEPGKTLF--KQEVPIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFSETA 307
            ||:  ..|.:...|.|  ||.|.||:||:||.:|.|..|.:.:..:||||.::||....||:||.
 Worm   178 SAIGQGSKGDDDTTTFFYKQPVAIPSYLIAIVVGCLEKRDISDRCAVWAEPSVVDKAHWEFAETE 242

  Fly   308 TMLKTATELCGPYVWKQYDLLVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTG 372
            .:|.:|.|:.|.|:|.:||::.:||||||||||||||||:||||:|||:||..|:||||||||:|
 Worm   243 DILASAEEIAGKYIWGRYDMVCLPPSFPFGGMENPCLTFLTPTLIAGDRSLVSVIAHEIAHSWSG 307

  Fly   373 NLVTNKNFEHFWLNEGFTVFVESKIVGRMQGAKELDFKMLSNLTD-LQECIRTQLNKTPELTKLV 436
            |||||.::||||||||||:|:|.||.||:.......|...:..|: |...:..|...|.:.|||:
 Worm   308 NLVTNSSWEHFWLNEGFTMFIERKICGRLVSEDYRQFMAFNGWTNSLIPAVYEQFTPTHQFTKLI 372

  Fly   437 VDLSNCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDY 501
            .|.:|..||.|||.|||.|||..|.|||...||..:||.:|:||||.:|:::|::..::..||.|
 Worm   373 QDHTNVDPDVAFSCVPYEKGSALLFYLEQKLGGSEIFEAYLKDYLKTFAHQAIDSWQWKDHLYKY 437

  Fly   502 FIDTDKKDKLSAVDWDLWLKSEGMPPVIPNFDESLANVTKELASLWSSKSVAELAD-SAEIKTTI 565
            |  .|:|:.|..|::|||....||||..||:.:|:....:.|...|.:...:.:.| ::|....:
 Worm   438 F--ADQKEVLDTVNFDLWFNGVGMPPEKPNYGQSMVEACEVLLKKWLAADESTVGDITSEDYYAM 500

  Fly   566 SIHQLIDFLGKLIESKDIVDLNEGKINLLESTYNLKSSKNAEVRFRLNRLIIRARLIKRLDEILE 630
            ...|.|:.|.:|.:....::  ..|::.|...|.|..|:|:|:.....||.|:::..:.:.:.|:
 Worm   501 QPLQQIELLSQLWQHDPPIE--HYKLDALNKLYKLNDSQNSELLLNWLRLCIKSKWEECIPKALD 563

  Fly   631 FANSNFRMKFCRPIYRDLAGWPEAKPAAIRNFVNVKDQMMAVCSHTIEKDLGLK 684
            |.||..|:|||||||||||.||.|...|...::..:.||..:.:..|.|||.::
 Worm   564 FVNSQGRLKFCRPIYRDLAQWPIANKKARDVYLKGRSQMHPITAEMIAKDLHIR 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 256/610 (42%)
ltah-1.2NP_500385.1 M1_LTA4H 12..455 CDD:341062 207/449 (46%)
Leuk-A4-hydro_C 504..614 CDD:462686 38/111 (34%)
Blue background indicates that the domain is not in the aligned region.

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