DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and Lnpep

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001106874.1 Gene:Lnpep / 171105 RGDID:621752 Length:1025 Species:Rattus norvegicus


Alignment Length:669 Identity:159/669 - (23%)
Similarity:266/669 - (39%) Gaps:155/669 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LCTSHKLLPIYQVQKRNMGRLGVVDPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLT 119
            :.|:.|:.|..|:      ||          |..|..:...|:...:..:...:|||       |
  Rat   154 IATNGKVFPWAQI------RL----------PTAIIPQRYELSLHPNLTSMTFRGSV-------T 195

  Fly   120 ANLDKILLDVRDI-------NVTNATLLAGGS---------ELPINFFISDAVDDIGQKLTLELP 168
            .:| :.|.|.|||       |:::.|.::..|         |.|.:           :::.:..|
  Rat   196 ISL-QALQDTRDIILHSTGHNISSVTFMSAVSSQEKQVEILEYPYH-----------EQIAVVAP 248

  Fly   169 SGTAKG-SLNVRIDYET--SSSASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKF 230
            .....| :..::|:|..  |:|..|...:..|....::..:..:|.:.:.|||..||.|.||.|.
  Rat   249 ESLLTGHNYTLKIEYSANISNSYYGFYGITYTDKSNEKKNFAATQFEPLAARSAFPCFDEPAFKA 313

  Fly   231 TYDATVEHPSELTALMSALIDKK-----EPG--KTLFKQEVPIPAYLVAIAIGKL--VSRPL-GE 285
            |:...:......|||.:  :.||     |.|  :..|.:.|.:..||||..:|::  :|:.: |.
  Rat   314 TFIIKITRDEHHTALSN--MPKKSSVPTEEGLIQDEFSESVKMSTYLVAFIVGEMRNLSQDVNGT 376

  Fly   286 NSSVWAEEAIVDACAEEFSETATMLKTATELCGPYVWKQYDL----LVMPPSFPFGGMEN-PCLT 345
            ..||:|....:|........|..:|    |....|...||.|    ||..|.|..|.||| ..||
  Rat   377 LVSVYAVPEKIDQVYHALDTTVKLL----EFYQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLT 437

  Fly   346 FVTPTLL--------AGDKSLADVVAHEIAHSWTGNLVTNKNFEHFWLNEGFTVFVESKIVGRMQ 402
            |...|||        |..|.:..::|||:||.|.|||||.:.:...||||||..|:|...|.:: 
  Rat   438 FREETLLYDNATSSVADRKLVTKIIAHELAHQWFGNLVTMQWWNDLWLNEGFATFMEYFSVEKI- 501

  Fly   403 GAKELDFKMLSNLTDLQEC-----IRTQLNKTPELTKLVVDLSNCGPDDAFSSVPYIKGSTFLRY 462
                  ||.|::..|..:.     .:..||.:..::..|......  ::.|.|:.|.||::.|..
  Rat   502 ------FKELNSYEDFLDARFKTMRKDSLNSSHPISSSVQSSEQI--EEMFDSLSYFKGASLLLM 558

  Fly   463 LEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYF-------IDTDKKDKLSAVDWDLWL 520
            |:. :....||:..:..||..::|.:|::.|    |:|.|       :|..|..|       .|.
  Rat   559 LKS-YLSEDVFQHAIILYLHNHSYAAIQSDD----LWDSFNEVTGKTLDVKKMMK-------TWT 611

  Fly   521 KSEGMPPV----------------IPNFDESLANVTKELASLWSSKSVAELADSAEIKTTISIHQ 569
            ..:|.|.|                .|:....:.:  .:.:.||.. .::.:.|........|: .
  Rat   612 LQKGFPLVTVQRKGTELLLQQERFFPSMQPEIQD--SDTSHLWHI-PISYVTDGRNYSEYRSV-S 672

  Fly   570 LIDFLGKLIESKDIVDLNEG----KINLLESTYNLKSSKNAEVRFRLNRL-----II----RARL 621
            |:|      :..|:::|.|.    |:|...:.|.:....:......:|:|     ::    ||.|
  Rat   673 LLD------KKSDVINLTEQVQWVKVNTNMTGYYIVHYAHDGWAALINQLKRNPYVLSDKDRANL 731

  Fly   622 IKRLDEILEFANSNFRMKF 640
            |..:.|:........:|.|
  Rat   732 INNIFELAGLGKVPLQMAF 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 153/645 (24%)
LnpepNP_001106874.1 Dileucine internalization motif. /evidence=ECO:0000255 53..54
Dileucine internalization motif. /evidence=ECO:0000255 76..77
Tankyrase binding. /evidence=ECO:0000250 96..101
M1_APN-Q_like 176..612 CDD:341064 126/481 (26%)
ERAP1_C 689..1009 CDD:463368 12/62 (19%)
Blue background indicates that the domain is not in the aligned region.

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