DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10602 and Rnpepl1

DIOPT Version :10

Sequence 1:NP_609916.5 Gene:CG10602 / 35146 FlyBaseID:FBgn0032721 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_852070.3 Gene:Rnpepl1 / 108657 MGIID:1914170 Length:720 Species:Mus musculus


Alignment Length:656 Identity:192/656 - (29%)
Similarity:301/656 - (45%) Gaps:67/656 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 VDPSSYSQPDLITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDKILLD------VRDINVTN 136
            :|.:|.|...|....|..|..::...|.::.|.::.....|......::||      :..::...
Mouse    28 LDVASASSAQLFRLRHLQLGLELRPEARELAGCLVLELCALRPAPRALVLDAHPALRLHSVSFRR 92

  Fly   137 ATLLAGGSELPINF----------------------------FISDAVDDIGQKLTLELPSGT-A 172
            |:.:   ||.|..|                            |..|...|.|..||:.||... |
Mouse    93 ASAV---SESPCTFAFPAPGSGPPLPGFADAPGAESASCPLAFRLDPFTDYGSSLTVTLPPEVQA 154

  Fly   173 KGSLNVRIDYETSSSASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTYDATVE 237
            .....|.:.| ||:.|..:.||:|..|.|...|::|:|..::..||..||.||||||.||.|.|:
Mouse   155 HQPFQVILRY-TSTDAPAIWWLDPELTYGNAKPFVFTQGHSVCNRSFFPCFDTPAVKCTYSAVVK 218

  Fly   238 HPSELTALMSAL--IDKKEPGKTLFKQEVPIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACA 300
            .|..:..||||.  :..:|.|...|..|.|:||||||:..|.|....:|..|.||||..::....
Mouse   219 APLGVQVLMSATQSVYVEEEGLYHFHMEHPVPAYLVALVAGDLKPADIGPRSRVWAEPCLLPTAT 283

  Fly   301 EEFSETATM-LKTATELCGPYVWKQYDLLVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAH 364
            .:.|..... |..|..|.|||:|.:||::.:|||||...||||||||:..::|..|:.|...|.|
Mouse   284 SKLSGAVEQWLSAAERLYGPYMWGRYDIVFLPPSFPIVAMENPCLTFIISSILESDEFLVIDVIH 348

  Fly   365 EIAHSWTGNLVTNKNFEHFWLNEGFTVFVESKIVGRMQGAKELDFKMLSNLTDLQECIRTQLNKT 429
            |:||||.||.|||..:|..||:||...:.:.:|.....||.....:....|..|...:|. |.:.
Mouse   349 EVAHSWFGNAVTNATWEEMWLSEGLATYAQRRITTETYGAAFTCLETAFRLDALHRQMRL-LGED 412

  Fly   430 PELTKLVVDLS-NCGPDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKD 493
            ..::||.|.|. ...|....:...|.||..|:.||..|.|||..|:.|||.|::||.:.|:..:|
Mouse   413 SPVSKLQVKLEPGVNPSHLMNLFTYEKGYCFVYYLSQLCGGPQRFDDFLRAYVEKYKFTSVVAQD 477

  Fly   494 FQSALYDYFIDTDKK--DKLSAVDWDLWLKSEGMPPVIPNFDE--SLANVTKELASLWSSKSVAE 554
            ...:...:|.:..::  |..:.::::.||.:.|.|...|:..:  ||....:.|..||:::.:.:
Mouse   478 LLDSFLSFFPELKEQSVDCRAGLEFERWLNATGPPLAEPDLSQGSSLTRPVEALFQLWTAEPLEQ 542

  Fly   555 LADSAE---------IKTTISIHQLIDFLGKLIESKDIVDLNEGKINLLESTYNLKSSKNAEVRF 610
            .|.||.         .:|.:.:.:|:|  |..:..:.::.|::...:||:       |.|||:|.
Mouse   543 AAASASAIDISKWRTFQTALFLDRLLD--GSPLPQEVVMSLSKCYSSLLD-------SMNAEIRI 598

  Fly   611 RLNRLIIRARLIKRLDEILEFANSNFRMKFCRPIYRDLAGWPEAKPAAIRNFVNVKDQMMAVCSH 675
            |..::::|......|..:..|..|.....:..|:|.||. ....|..|:..|...:.::......
Mouse   599 RWLQIVVRNDYYPDLHRVRRFLESQMSRMYTIPLYEDLC-TGALKSFALEVFYQTQGRLHPNLRR 662

  Fly   676 TIEKDL 681
            ||::.|
Mouse   663 TIQQIL 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10602NP_609916.5 Ribosomal_L13 15..>50 CDD:459856
leuko_A4_hydro 79..681 CDD:274120 191/653 (29%)
Rnpepl1NP_852070.3 M1_LTA4H 29..507 CDD:341062 153/482 (32%)
Leuk-A4-hydro_C 555..668 CDD:462686 26/122 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 671..708
Blue background indicates that the domain is not in the aligned region.

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