DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL13 and RPL16B

DIOPT Version :9

Sequence 1:NP_523598.2 Gene:mRpL13 / 35145 FlyBaseID:FBgn0032720 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_014330.1 Gene:RPL16B / 855655 SGDID:S000005013 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:130 Identity:25/130 - (19%)
Similarity:52/130 - (40%) Gaps:27/130 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KTHLLG-----LQKPIYHPMNDCGDHVVLINTREIALPGDEWVKRVYFHHTGYPGGASWTLAWQL 94
            |.||||     :.|.:.:     |..:|::....:.:.|:.:..::.:|.......|........
Yeast    11 KDHLLGRLASTIAKQVLN-----GQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNKTRGPF 70

  Fly    95 HEKDPTMVMKKAV-----YNSMRGNLQRRHTMQRLHLFADDQVPEEILQNVTNQIRTPRSIPQRL 154
            |.:.|:.::.||:     :.:.||    :..::||.:|.....|.:..:.|.        :||.|
Yeast    71 HFRAPSRILYKAIRGMVSHKTARG----KAALERLKIFEGIPPPYDKKKRVV--------VPQAL 123

  Fly   155  154
            Yeast   124  123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL13NP_523598.2 Ribosomal_L13 16..141 CDD:278969 21/115 (18%)
RPL16BNP_014330.1 PTZ00068 1..198 CDD:240253 25/130 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0102
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.