DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL13 and RPL16A

DIOPT Version :10

Sequence 1:NP_523598.2 Gene:mRpL13 / 35145 FlyBaseID:FBgn0032720 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_012133.1 Gene:RPL16A / 854673 SGDID:S000001395 Length:199 Species:Saccharomyces cerevisiae


Alignment Length:125 Identity:24/125 - (19%)
Similarity:49/125 - (39%) Gaps:17/125 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KTHLLGLQKPIYHPMNDCGDHVVLINTREIALPGDEWVKRVYFHHTGYPGGASWTLAWQLHEKDP 99
            |.||:|....:.......|..:|::...|:.:.|:.:..::.:|.......|........|.:.|
Yeast    12 KGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAP 76

  Fly   100 TMVMKKAV-----YNSMRGNLQRRHTMQRLHLFADDQVPEEILQNVTNQIRTPRSIPQRL 154
            :.:..||:     :.:.||    :..::||.:|.....|.:..:.|.        :||.|
Yeast    77 SRIFYKALRGMVSHKTARG----KAALERLKVFEGIPPPYDKKKRVV--------VPQAL 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL13NP_523598.2 Ribosomal_L13 15..133 CDD:459856 19/102 (19%)
RPL16ANP_012133.1 PTZ00068 6..199 CDD:240253 24/125 (19%)

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