DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL13 and AT3G01790

DIOPT Version :10

Sequence 1:NP_523598.2 Gene:mRpL13 / 35145 FlyBaseID:FBgn0032720 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_186828.2 Gene:AT3G01790 / 821078 AraportID:AT3G01790 Length:205 Species:Arabidopsis thaliana


Alignment Length:117 Identity:36/117 - (30%)
Similarity:53/117 - (45%) Gaps:0/117 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 WHIYDCTWQNPFESAKLVKTHLLGLQKPIYHPMNDCGDHVVLINTREIALPGDEWVKRVYFHHTG 81
            |.::|...|.....|..:.|.|....||.|.|..|.||..:::|.:||...|.:...:.|..|||
plant    32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTG 96

  Fly    82 YPGGASWTLAWQLHEKDPTMVMKKAVYNSMRGNLQRRHTMQRLHLFADDQVP 133
            |.|............||||.|::|||:..:..|..|....::|.:|...:.|
plant    97 YIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHP 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL13NP_523598.2 Ribosomal_L13 15..133 CDD:459856 35/115 (30%)
AT3G01790NP_186828.2 PLN00205 16..205 CDD:177795 36/117 (31%)

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